Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2456 |
Symbol | |
ID | 5058919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2761887 |
End bp | 2762687 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474714 |
Product | chitin-binding domain-containing protein |
Protein accession | YP_001159280 |
Protein GI | 145594983 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.361389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC GCAAGCTCAT CGCCTACCCT TTGACAGCTG TCGCGGCCGC GGCCGGCTCG ACACTGGTAT TCGCGTCGCC CGCCTCGGCA CACGGGTACG TGGCCTCGCC GCCGAGCCGG CAGGCGCTGT GCGCGCAACG CGCCGTTCCG GACTGCGGCC CAATCACGTA CGAGCCGCAG AGTGTGGAGG GGCCGAAGGG CCTCAAACGC TGTGACGGCG GGCTTTCCCA GTTCGCCGTG CTGAACGACA ACAACCGTGG CTGGCCGGCT CGGGAGGTGG GCGACACCGT CACCTTCAGC TGGACGCTGA CGGCTCGGCA TCGCACCAGC ACGTGGGAGT ACTTCATCGG CGACACCCGG ATCGCCCAGT TCGACGGTGG TAACCGACAG CCCGAGGCGG TCGTCACCCA CCGGGTCGAT CTGAGTGACT TCGCGGGCCC GCAGACGGTA CTGGCGATCT GGAACATCGG CGACACACCG ATGGCCTTCT ACAACTGCAT CGACCTCGAC GTGCAGGGTG GAGGTACCAC CCCGCCGACC CAGTCGCCGA CTCCCAAACC CACCAGCACG CCGACGCAGG AACCGACCGG CCAACCCACA TCGACTGCCC TGCCCACCAA CCCAGGGACG CCAGGTCAGA CCGGTGGGCC GACCGCCCCA GCCTGGGCAG CGGGTACCGC CTACCGGGTC GGCGACGAGG TCGCCTTCGA CGGAGAGCGC TACCGTTGCC GGCAGGCTCA CACCGCGATT CGTAGCTGGG AGCCGTCGCT GTTCACTCTC GCCCTGTGGC TGCCGGTGTG A
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Protein sequence | MNTRKLIAYP LTAVAAAAGS TLVFASPASA HGYVASPPSR QALCAQRAVP DCGPITYEPQ SVEGPKGLKR CDGGLSQFAV LNDNNRGWPA REVGDTVTFS WTLTARHRTS TWEYFIGDTR IAQFDGGNRQ PEAVVTHRVD LSDFAGPQTV LAIWNIGDTP MAFYNCIDLD VQGGGTTPPT QSPTPKPTST PTQEPTGQPT STALPTNPGT PGQTGGPTAP AWAAGTAYRV GDEVAFDGER YRCRQAHTAI RSWEPSLFTL ALWLPV
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