Gene Strop_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2445 
Symbol 
ID5058908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2750480 
End bp2750989 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID640474704 
ProductNUDIX hydrolase 
Protein accessionYP_001159270 
Protein GI145594973 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.123324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.552765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGC GCTACCCGAA CCTGGCGCAT CGACTAGCTA GAGTCGCGGT GATGGAGGCG 
AGGTATCGGC CGGCAGCGCG GGTGATCTGT CTGGACGCTG CGTGTCGCGT GCTTCTGCTG
CGTTGGCATG ATCCAGTTGA CGGGGTATGG CTGTGGGAAC CGCCTGGTGG TGGCATCGAG
CCGGGTGAGA CGCCACTAGC GGCGGCCCGG CGGGAGCTGG TGGAGGAGAC GGGACTGGAC
CCCGGTGCGG TCCGTGACCG GTCGATGCCG GTCGAGCGGG ACGTGCGGTG GAAGGGCACG
CGGTATGTCG GCCCGGAGGA CTTCTTCGTG GCGTACTTCG CCGAGGACCG ACCATCGCTG
ACGCGGACGG GTCTCCTCCC TGACGAGCAG GTCGACCTGC ATTCGCATGC ATGGGTTTCG
TGGTCGGGCC TGGCCTCGTT GCCGGATCGG GTCGAGCCGC CGCACCTGCT GACCGTCCTT
CGCGCCCTGA CCGGACGGTC CCTGGCATGA
 
Protein sequence
MRWRYPNLAH RLARVAVMEA RYRPAARVIC LDAACRVLLL RWHDPVDGVW LWEPPGGGIE 
PGETPLAAAR RELVEETGLD PGAVRDRSMP VERDVRWKGT RYVGPEDFFV AYFAEDRPSL
TRTGLLPDEQ VDLHSHAWVS WSGLASLPDR VEPPHLLTVL RALTGRSLA