| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2421 |
|---|
| Symbol | |
|---|
| ID | 5058884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2717572 |
|---|
| End bp | 2718063 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640474680 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159246 |
|---|
| Protein GI | 145594949 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.11336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAGG CTTTCACCGT GGAACCAATC GCACACGTCG TGGGAGGAAG GACCGAACCG
ACTGACGACT ACTGGGGAGG GGTAAGGGCG ATCGTTCGAA TTGACGAGAA GCGTTTCACT
CCTGAATCCG CCAAAGGGCT TGACGCGTTC TCTCACCTCG AAGTCGTTTT TCGCTTTCAT
CTTACGGACC CGACGGACCT TAACCTCGGC GCCCGCCGGC CACGAGACAA CCCAGACTGG
CCGGAAGTGG GTATCTTTGG CCACCGAAAC ATGAGACGGA TCAACTGGCT TGGTGTATCG
CGCTGCCGTC TGCTCAAAGT GGACGGTCTC GACCTTCATG TTGAGGGTCT TGATGCGGTT
GACAGCACAC CGGTGCTTGA TATCAAGCCA TGGTTTGTTG AGTTCGGTCC CCGTGGCGAG
GTGTTTCAAG CACACTGGAC GACCGACATG CTCGGTCACT ACTTTGCCGC GCAGTCACCC
CGAAAGGAAT AG
|
|---|
| Protein sequence | MGEAFTVEPI AHVVGGRTEP TDDYWGGVRA IVRIDEKRFT PESAKGLDAF SHLEVVFRFH
LTDPTDLNLG ARRPRDNPDW PEVGIFGHRN MRRINWLGVS RCRLLKVDGL DLHVEGLDAV
DSTPVLDIKP WFVEFGPRGE VFQAHWTTDM LGHYFAAQSP RKE
|
|---|
| |