Gene Strop_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2412 
Symbol 
ID5058875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2710328 
End bp2710738 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content66% 
IMG OID640474671 
Producthypothetical protein 
Protein accessionYP_001159237 
Protein GI145594940 
COG category[S] Function unknown 
COG ID[COG4828] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.45762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCA TGTTCGACCA GCACTGGTTG TTGGAGGCGG TGGACCTCCT GGTACGGGTG 
GTCGAGGCCG CCGGCATCCT CATTATCTTT GTCGGTGCGA TGATGGCGTT CGTCCGGTTC
GTGATCGTGG GGTTGCGGTA CCGGCAGAGC AAGGCTTTCG TGCCGATCCG GCTGACTCTC
GGGCGGTTCC TGACCCTCGG GTTGGAGTTT CAACTCGCCT CGGACATTAT GCGCACCGCC
GTCGCTCCGA CCCTGCTGGA CATCGCCGAG CTGGCTGCGG TGGCGGCGAT CCGGACCGCG
CTGAACTACT TCCTCGCCCG CGAGATCAAA CAGGAGCGCC GCGAGATCGC CGAGCTCGGC
TCGCCCGGGT CCGCCGACTC GAACCAGGCG GGTCCGGGGC GGGCCTCGTG A
 
Protein sequence
MDGMFDQHWL LEAVDLLVRV VEAAGILIIF VGAMMAFVRF VIVGLRYRQS KAFVPIRLTL 
GRFLTLGLEF QLASDIMRTA VAPTLLDIAE LAAVAAIRTA LNYFLAREIK QERREIAELG
SPGSADSNQA GPGRAS