Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2334 |
Symbol | |
ID | 5058797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2626505 |
End bp | 2627473 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474594 |
Product | phage integrase family protein |
Protein accession | YP_001159160 |
Protein GI | 145594863 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00113164 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGTACGGC TGATCGAGGA CTTCCTGACT GATCGCGCCA CCCGCAAGCC TTCCCCGCAC ACAGTGGAGG CATACCGGCG AGATCTGCGC ACCGTGGCGA GCATCGCCGC CGACGCGCTC ACCTCTCCCC TCCCCCTCGA TGCCCTCCCG TTGGCGGCGC TCCACTCCCG CACACTGCGG TCGGCGTTCG CCCACTTTGC CGCTACCCGC TCCGCCGCGT CGGTGCATCG CGCCTGGTCC ACCTGGAACA GCTTTTTCGT GTTCCTGGTC GCGGACGGAG TCGTCGCTGG CAACCCGATG CCCGCGGTGG GACGCCCTCG AGCACCCCTA CCCCGGCCCA AGCCACTGCG CGGGGCGGAC ACCCCCGAGC AGTTGCTGAC GGCCGTGGCC CGTGTCGATG GTCGGCAGCG AGACCCCTGG CCGCAGCGGG ATCTGGCGGT GTTGGCGTTG GCGCTGTGTG GAGGGTTACG GCTGGCCGAG ATGCTGGCGC TTCGGGTGGC GTCCCTGGCC GGACGGGTCG GTGAGCGACG GCTTGACGTT GCCGGAAAGG GCGGGCGGCC GCGGGTGGTG CCGGTGGAGC CGGAGTTGGA CCAGGTGTTG GCGGACTATC TGGAAAGTTG TCGTCGCCGA TTTGGATCCG CAACGGTGCG TCCGGACGCA CCGTTGCTGA TGGATCGGCG GGGTGGGCCA CTGCGCCGGG GTGGGTTGCA GTACTTGGTG GATTCGTGCT TTCGGCGGGC GGGGATCGGT GACCGGGTGC CCCAGGGGGC GCGGCTACAC GCATTGCGGC ACACGTTCGC GACGCGGCTG GCTGAGGACG GTGCGAGCGC GGCGGAAATC ATGCGGCTAC TGGGGCATGT GTCGCTGGCG TCATCCCAGG CGTACATCGA GGTGACGGCG GGTCAACAGC GGGCGGCGGT GCGCGCGAAT CGCACTCATC GCGTGCTGGC GGGGTTGTTG TCGGGTTGA
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Protein sequence | MVRLIEDFLT DRATRKPSPH TVEAYRRDLR TVASIAADAL TSPLPLDALP LAALHSRTLR SAFAHFAATR SAASVHRAWS TWNSFFVFLV ADGVVAGNPM PAVGRPRAPL PRPKPLRGAD TPEQLLTAVA RVDGRQRDPW PQRDLAVLAL ALCGGLRLAE MLALRVASLA GRVGERRLDV AGKGGRPRVV PVEPELDQVL ADYLESCRRR FGSATVRPDA PLLMDRRGGP LRRGGLQYLV DSCFRRAGIG DRVPQGARLH ALRHTFATRL AEDGASAAEI MRLLGHVSLA SSQAYIEVTA GQQRAAVRAN RTHRVLAGLL SG
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