Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2332 |
Symbol | |
ID | 5058795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2624978 |
End bp | 2625592 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474592 |
Product | regulatory protein, TetR |
Protein accession | YP_001159158 |
Protein GI | 145594861 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000899921 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATGTGCG GCATGGCACC GGACCCCAAC CGTCGGAGGG AAAGCTCCCG ACGGGCCATC CTCACGGCGG CGTTCGACCT GCTACAGGAG GTCGGCTACG CCAAACTCAC CATCGAGGGC ATCGCCGCGC GCGCCGGAGT CGGCAAGCAG ACCATCTACC GCTGGTGGCC GTCCAAAGGC ATCGTCATCT TCGACGCCTT CCTCATGCTC AACGAGGCCC CCGAGGGCGG GCCTCCACTG CTTCCCGACA CCGGCGACCT GCACGCCGAC CTGACCGCAG TGCTACGCGC CACCGTCGTG GAGCTCAACG ACCCGCGCTA CGACCAGCCG CTGCGCGCGT TGTCCACCGA GATCACGCAC GACCCCGAAC TGGCAGCCGC CTACGTCGAA CGTCTGGACA AGCCCATGAG GCAAGCCAAG CGGCAACGGC TGCGCAGCGC CCAACAGGCA GGCCAACTCG CGGAGGACCT CGACCTCGAC ATGGCGGTGG ACATCATCTG GGCGCCAGTG CTCAACCGCT GGCTACAGCG CAGCGGACCC CTCACCACCG AGTACGCCGA CAGCATCGTC GCCATCGCCC TCGACGGCCT GCGCCCCCGC CGCCCGGGCG ACTGA
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Protein sequence | MMCGMAPDPN RRRESSRRAI LTAAFDLLQE VGYAKLTIEG IAARAGVGKQ TIYRWWPSKG IVIFDAFLML NEAPEGGPPL LPDTGDLHAD LTAVLRATVV ELNDPRYDQP LRALSTEITH DPELAAAYVE RLDKPMRQAK RQRLRSAQQA GQLAEDLDLD MAVDIIWAPV LNRWLQRSGP LTTEYADSIV AIALDGLRPR RPGD
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