Gene Strop_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2332 
Symbol 
ID5058795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2624978 
End bp2625592 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID640474592 
Productregulatory protein, TetR 
Protein accessionYP_001159158 
Protein GI145594861 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000899921 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGTGCG GCATGGCACC GGACCCCAAC CGTCGGAGGG AAAGCTCCCG ACGGGCCATC 
CTCACGGCGG CGTTCGACCT GCTACAGGAG GTCGGCTACG CCAAACTCAC CATCGAGGGC
ATCGCCGCGC GCGCCGGAGT CGGCAAGCAG ACCATCTACC GCTGGTGGCC GTCCAAAGGC
ATCGTCATCT TCGACGCCTT CCTCATGCTC AACGAGGCCC CCGAGGGCGG GCCTCCACTG
CTTCCCGACA CCGGCGACCT GCACGCCGAC CTGACCGCAG TGCTACGCGC CACCGTCGTG
GAGCTCAACG ACCCGCGCTA CGACCAGCCG CTGCGCGCGT TGTCCACCGA GATCACGCAC
GACCCCGAAC TGGCAGCCGC CTACGTCGAA CGTCTGGACA AGCCCATGAG GCAAGCCAAG
CGGCAACGGC TGCGCAGCGC CCAACAGGCA GGCCAACTCG CGGAGGACCT CGACCTCGAC
ATGGCGGTGG ACATCATCTG GGCGCCAGTG CTCAACCGCT GGCTACAGCG CAGCGGACCC
CTCACCACCG AGTACGCCGA CAGCATCGTC GCCATCGCCC TCGACGGCCT GCGCCCCCGC
CGCCCGGGCG ACTGA
 
Protein sequence
MMCGMAPDPN RRRESSRRAI LTAAFDLLQE VGYAKLTIEG IAARAGVGKQ TIYRWWPSKG 
IVIFDAFLML NEAPEGGPPL LPDTGDLHAD LTAVLRATVV ELNDPRYDQP LRALSTEITH
DPELAAAYVE RLDKPMRQAK RQRLRSAQQA GQLAEDLDLD MAVDIIWAPV LNRWLQRSGP
LTTEYADSIV AIALDGLRPR RPGD