| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2331 |
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| Symbol | |
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| ID | 5058794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2624011 |
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| End bp | 2624868 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474591 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001159157 |
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| Protein GI | 145594860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000899921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCGACC TATCCGAGAC CACTGCCCGC ACCTGGTTCA TTACCGGCGC CAGTCGTGGT
CTGGGTCGCG CCTTCACCGT GACCGCGCTC GAACGCGGAG ATCGGGTGGT CGCGGCCGCT
CGGACCATCG CCTCCGAGGA CTTCGACGAG CGCCACGGTG ACCGGCTACT CCCCCTGCCG
TTGGACCTGA CCGACCGCAC GGCGGTCTTC GCCGCTGTCG CCACCGCGGT CGAACACTTT
GGGCGGCTCG ACATCGTCGT CAACAACGCC GGCACCCTTT CCCTGGGCAT GATCGAGGAA
TTCACCGAGG AGCAGGCGAG AGCCCAGTTC GACGTGAACC TCTACGGCGC GCTCTGGGTC
TGCCAGGCTG TCCTGCCGTA CCTGCGCGCC CAGCGGATGG GCCACATCGT GCAGATCTCC
AGCATTGCCG CCCTCGGCGG CTTTCCCAGT ACGGGCATGT ACAGCGCGAG CAAGTTCGCG
CTCGAAGGCA TGAGCGAAGC TCTCGCATTG GAGGCTGCCG CCTTTGGCAT CAAGGTCAGC
ATCGTGCAGC CAGGCGGATA CTGGACCGAC CTCTACACGA GTATGACCAC CACCCTACCG
ATGGAGGCCT ACGATCCGCT CCGCGCCCAG GTGCAGGCGC AGTGGGCGGA TGGCTCGGTC
GACAGTGACC CCCGGTTCGC CGCCGAAGCC CTGCTCAAGC TCGTCGACAG CGACGAACCG
CCGCTACGGC TGATACTCGG TGGCACCGTC TACGACCTGG CCTTCGACAT CTCCCGCCGT
CGCCTGGACA CCTGGGCAGG CTGGGAGCAG GTCAGCCGGG CCGCCGAACA CGCCGTTCCG
GCACCCGAGC GCACATAG
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| Protein sequence | MRDLSETTAR TWFITGASRG LGRAFTVTAL ERGDRVVAAA RTIASEDFDE RHGDRLLPLP
LDLTDRTAVF AAVATAVEHF GRLDIVVNNA GTLSLGMIEE FTEEQARAQF DVNLYGALWV
CQAVLPYLRA QRMGHIVQIS SIAALGGFPS TGMYSASKFA LEGMSEALAL EAAAFGIKVS
IVQPGGYWTD LYTSMTTTLP MEAYDPLRAQ VQAQWADGSV DSDPRFAAEA LLKLVDSDEP
PLRLILGGTV YDLAFDISRR RLDTWAGWEQ VSRAAEHAVP APERT
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