Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2330 |
Symbol | |
ID | 5058793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2623369 |
End bp | 2623980 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640474590 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001159156 |
Protein GI | 145594859 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.699676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000887341 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACACTCC TCAACGTCTC ACTACGTTCG CTCTACTGGA ACGAACGTAA CACTAAAGTG GTACACATGG ATCTGGCGCG TACGGTCGGC TCGAATGTTC ACCGGTTGCG AAACACCGCT GGCATGTCCC TGGCGGACCT GGCCACAGCC GGCGACATCA GCAAGACCAC CCTGCACGGC ATCGAGCAGG GGCATGGCAA CCCGACCCTC AGCACCCTGT GGGCCCTGGC CACGGCACTG CGGGTGCCGC TCGGTGAACT ACTGGAGACG CCCACCCCCC GCACCGACGT CGTACGCGCC GATGACCAAC GACCACGCAT CAGTGGGGAC GCGGTCAGCG CCCGCCTGCT CCACCGCATC CGACTACACG GCACCGTGGA GGTCTACGAC ATCGACGTGG CCCAGACCAC CCAGCACTCA ACCGCCCACC TACCCGGCGT GCAGGAGTGC CTCATCCTCA CCCATGGAAG CATCACCACC GGCCCCACCG ACGCCGCCGT CACCCTGACC GCACACGACT CCATTCGGTT CGACGCCAAC CACCGGCACC AGTACCAGGG ACATGGCCAG CACAACCGAG CAGTTCTCAT CATGCTGCAC CCCGACACGT GA
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Protein sequence | MTLLNVSLRS LYWNERNTKV VHMDLARTVG SNVHRLRNTA GMSLADLATA GDISKTTLHG IEQGHGNPTL STLWALATAL RVPLGELLET PTPRTDVVRA DDQRPRISGD AVSARLLHRI RLHGTVEVYD IDVAQTTQHS TAHLPGVQEC LILTHGSITT GPTDAAVTLT AHDSIRFDAN HRHQYQGHGQ HNRAVLIMLH PDT
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