Gene Strop_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2298 
Symbol 
ID5058761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2594398 
End bp2595660 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content69% 
IMG OID640474560 
Productpeptidase M48, Ste24p 
Protein accessionYP_001159126 
Protein GI145594829 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA CAACGGTAGC CGGTGACACG TGTCCGGAGT GCGGTGCTGC CACGGTCGCT 
CCACGCGAGA CCCTGCCGTG GTGCCCGGCC TGCGAGTGGA ACCTCGAAGC GTACGACGCT
GAACGCATCG GCCCGTTCTT CGGCTGGCGG TGGTTGGACC GACGAATCCA CGACATCGGG
TACCGCATGA CCCGTCGCCA GTTCGACCGA CTGCTCGGGC GACCGCTGGG CAGTAGTGGC
GTCGGCGCAG CCACCGTCGT CACCGCCGCC GCATCCGGCT TGCTGTTCCT CGGCGTGGTG
GCCCTGGCTG CCACCGGGCT CTGGCTACTC GTCGCCTTCC CATTCCCGGG CCCGTCGCTT
CTGCTGGCAG TTCCCCTGCT CGCTCTCGCC GTCGGACTAC GGCCCCGCTT CGGGCGGCTC
GACCCCGACG CCGACGTCCT CCGCCGGGAC CGGTCACCCG AGCTTTTCAC CCTGGTTGAC
GAGGTGGCGC AGGCGTTAGG GACACCAGCT CCCAACGTGA TTGCCGTCAA CGCCGACTTC
AACGCGTACG CGACGACGGT AGGCATCCGC CGCCGGGTGC TGTGTCTCGG ACTGCCGTAC
TGGGGATCCC TCGCACCGCA GGAACGCGTC GCCCTGCTCG GTCACGAACT CGGCCACTTC
GTCAACGGCG ACCCGCGGCG GATGCTGCTC ACCCAGCCGG CGTTCACCAC CCTCGGCTGC
GCGGCGGACC TCCTCCGCCC TGCGCCATCG ACCGCCCCCA GCCTCATCGA ATGGATCGGG
GCGACCCTTG GGCGAATCAT CCAATACCCG CTGTCCCGTC TGTTGTTCAC GCTGCATGCG
GTACTCGTGT GCGTCGCGCT ACGAGACAGT CAACGGGCCG AGTACCTGGC TGACGAGATG
TCTGCGAAGG CCGCTGGATC AGCCGCCGCG AAAAGTCTGC TCGACACCGC GCTACGGGTC
GAGTCCATGG CACTCGCCGT ACGCCGGGAG TCCAGGGCGG GACACGGCCC CCAACGGTGG
CAGGCGGCGG TCGCCGAGTC GTGGGCGACC AGCGCCGACC AGCTGCCACC GTTGCGGCAG
CTGTCGGGCC GCGAGGAGGC GTCGCCGTTC TCCTCCCATC CACCCACCGG TCTGCGCCAC
CTGATGCTCG AAGGCGCTCA GTGCCACGAT CCGGCGGTGG TGCTCACCCA GGAACGGTCG
TCCCGCATCG ACAACGAGCT AACCAAGGAG TACGAGTCAG CCCGGCGGAT CCTGGCCTGG
TGA
 
Protein sequence
MIDTTVAGDT CPECGAATVA PRETLPWCPA CEWNLEAYDA ERIGPFFGWR WLDRRIHDIG 
YRMTRRQFDR LLGRPLGSSG VGAATVVTAA ASGLLFLGVV ALAATGLWLL VAFPFPGPSL
LLAVPLLALA VGLRPRFGRL DPDADVLRRD RSPELFTLVD EVAQALGTPA PNVIAVNADF
NAYATTVGIR RRVLCLGLPY WGSLAPQERV ALLGHELGHF VNGDPRRMLL TQPAFTTLGC
AADLLRPAPS TAPSLIEWIG ATLGRIIQYP LSRLLFTLHA VLVCVALRDS QRAEYLADEM
SAKAAGSAAA KSLLDTALRV ESMALAVRRE SRAGHGPQRW QAAVAESWAT SADQLPPLRQ
LSGREEASPF SSHPPTGLRH LMLEGAQCHD PAVVLTQERS SRIDNELTKE YESARRILAW