Gene Strop_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2220 
Symbol 
ID5058683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2512374 
End bp2513414 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content72% 
IMG OID640474483 
Producthypothetical protein 
Protein accessionYP_001159049 
Protein GI145594752 
COG category[C] Energy production and conversion
[G] Carbohydrate transport and metabolism 
COG ID[COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA TGTTCACCGT CGGGGGTAGC CAGTCCACCG TGTTCTGCAT CGCCCCGCTG 
GCGACCGCGG CCCGCAACGC CGGCCACGAG ATACTGCTGA CCGCCGACGA ACCGCTGCTG
GAGACCGCGG CGGCGATCGG GTTGCCCGCG GTCCCCACTC CCCATCCGGG AGAGCCCGCG
GCCCGGCTGC GGGCCCTGCT GGAGTTGGCG GGGCAGTGGC CGCCCGATGT GGTTGTCGGC
GGCCTGTCAT TCGTCCCCGG CCTCGTCGCC GTCGAGACCC AGGCGCTGTA CGTGCGTCAC
TACTGGGACA TCGCGCCGCT GCGGCCAGAG CCGGGAATCA GACCCGACCT GGAGCGACGT
GGCCTGAGCG AGCCACCGGC GGCCGACCTG TTCATCGACG TCTGCCCGCC GGGCCTACGG
CCGTCGCCCA CACCCGGCGC ACGGCCGATG CGCTGGATCC CGAAGAACCG GCAGCGTCGC
CTCCAGCCGT GGATGTACAC CCGGCCCGCC GACCGCCCCC GGGTTCTGGT TACCGCGGGC
ACGCGAAACC TCTTCCTCCA TTCACGCAGC AGCGTCATCC GGCACCTGGT TGACCAGCTC
ATCGCGGCCG GCGCCGAGGT GGTGATCGCG GCACCGGAGC GAGCCGCCGC GGAGTTCGGC
GCGCAGTTCC GCGATGTCCG CGTCGGCTGG GTCCCGCTGG ATGTCGTCGC CCCCACCTGC
GATCTGGCGG TACACCACGG CGGCGCGGCC ACCACGATGA CAGTGATGAA CGCCGGCGCG
CCGCATCTGG TCGTCCCCGA CAACGACTAC TCCCGGTCCG TCGCGAAGGC CCTCACCGCC
GTCGGCGCGG GCCTGACCGC CGCCCCGGTG CCCCCGGAGG GTGATCGGGC GGCGGTCGAG
GCGATCACCG CGAGTTGCCG GCAGATCCTT GCCGACCCCG GGTACGCCGA ACGCGCGCGC
TTCCTGGCCG CCGAGATCGC CGGACTACCG ACGCCCGCCG AGGTCGTCCA CATGGTCGAG
GAGTTGGCCG CGAGCCGGTA G
 
Protein sequence
MKFMFTVGGS QSTVFCIAPL ATAARNAGHE ILLTADEPLL ETAAAIGLPA VPTPHPGEPA 
ARLRALLELA GQWPPDVVVG GLSFVPGLVA VETQALYVRH YWDIAPLRPE PGIRPDLERR
GLSEPPAADL FIDVCPPGLR PSPTPGARPM RWIPKNRQRR LQPWMYTRPA DRPRVLVTAG
TRNLFLHSRS SVIRHLVDQL IAAGAEVVIA APERAAAEFG AQFRDVRVGW VPLDVVAPTC
DLAVHHGGAA TTMTVMNAGA PHLVVPDNDY SRSVAKALTA VGAGLTAAPV PPEGDRAAVE
AITASCRQIL ADPGYAERAR FLAAEIAGLP TPAEVVHMVE ELAASR