| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2216 |
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| Symbol | |
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| ID | 5058679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2508877 |
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| End bp | 2509863 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640474479 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001159045 |
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| Protein GI | 145594748 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.321568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGCG AACCACCCCT GGTGAGCGTA CTGGGAGCGT CTGGATACCT GGGATCGGTC
GTCACCGCCC GGCTGGCACA GCTTCCGATC CGACTGCGGG CCGCGTCGCG TCGCCGTAGC
TCAGTGCCGG AACAGGCGGT GGCCGAGGTG GAGGTCTGCA CCGGGGATCT CACCGAACCA
GAATGCCTGG CCGACGTCGT CGCGGGTGCC GACGTCATCT TTCACCTGGG TAAACACAGC
GGTGGGTGGC GTGACGCCGA CACCCCGGAG GGAGAGCGGG TGAACGTGGG CATCGTGCGC
GACCTCATCG AGATCCTCGG TCAGCGCCCG CCCACCCGGA CAACTCCGTT GGTGGTGTTC
GCCGCGACCA CCCTGCAAGT AGGACAGCCT CCGCAACGAC CGATGGACGG TAGCGAGCCG
GACCGCCCGG AGACCGCGTA CGGCCGGCAG AAGCTGACCG CCGAACGGCT GCTGAAGGCC
GCGACCGCGG CGTCGGTCCT GCGTGGGGTC AGCCTGCGAC TGCCGACCGT CTTCGGACAG
AGCTCGCTGT CCCGGGTGAC TGACCAGGGC GTGGTGGTCA CGATGGCCCG CCGGGCCCTG
GCCGGCCAGC CACTGACAAT GTGGCATGAC GGCACCGTTC GGCGGGACCT GGTGTACATC
GAGGATGCCG CGGACGCCTT CCTGGCCGCC ATGCGCTTCC CGGACGCGCT GACCGGACGA
CACTGGCTGG TGGGCTCCGG CCGCCCGGAC ACGCTGGGCG CGGTCTTCCG TCTGGTGGCG
AGTTCGGTCG CGGCGCAGAC CGGCGAGCCG ACCGTACCGG TGATCTCAGT ACCGGCGCCG
GACCACGCCC CCGTGATCGA CTTTCAGAGT ATGCAGATCG ACCCGACGCC CTTCCAACGT
GTCTCGGGGT GGTGCGCGCG TACGGAGCTT GGGGAGGCGG TGCACCGCAC GGTGGCGGCT
CTGCTCGACA GGAACGACCG GTTCTAG
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| Protein sequence | MSGEPPLVSV LGASGYLGSV VTARLAQLPI RLRAASRRRS SVPEQAVAEV EVCTGDLTEP
ECLADVVAGA DVIFHLGKHS GGWRDADTPE GERVNVGIVR DLIEILGQRP PTRTTPLVVF
AATTLQVGQP PQRPMDGSEP DRPETAYGRQ KLTAERLLKA ATAASVLRGV SLRLPTVFGQ
SSLSRVTDQG VVVTMARRAL AGQPLTMWHD GTVRRDLVYI EDAADAFLAA MRFPDALTGR
HWLVGSGRPD TLGAVFRLVA SSVAAQTGEP TVPVISVPAP DHAPVIDFQS MQIDPTPFQR
VSGWCARTEL GEAVHRTVAA LLDRNDRF
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