Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2182 |
Symbol | |
ID | 5058645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2470489 |
End bp | 2471154 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640474445 |
Product | hypothetical protein |
Protein accession | YP_001159011 |
Protein GI | 145594714 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.942905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.83113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTACGGC TCATCAATAC CGGCCTGGGC AGGACTGGCA CCACATCACT GAAGGTGGCG TTGGAGCGCC TCGGCTACGG ACCCTGCTAT CACATGTTTG ACATCGTCAA CGACTCGGAC CGGCTCCAGC AGTGGGAAGA AGTCGTCTGC GACGGACAGC GGCCCGACTG GAAGATGCTG TTCGACGGCT TCACCTCCGT CGTGGATGGG CCCAGCGCTG TCTACCACAA GGACATCACC CAGACGTTCC CCGAGGCGAA GGTGATTCTG ACTATTCGGG ACAGTGAGGA ATGGTACCGA AGCACGTACG ACACGCTGTA CCAGTTCGCC GTGCGGAACC GCGAAAATCC GCCGGAACCC GGCTCCATGC CGGCCCGGAT GTACCGATTC GTGAACACCA TGGTCTGGGA TGGCCTCTTC GGCGGACGCT TCGCCGACAA GGGCTACGCC ATTGATGTGT TCCGTCGGCA CAACGAGGAG GTCGCCAACT CCGTAGCCCC CGGCAACCTG CTCACTTATG ACGTACGGCA GGGATGGCAG CCGCTGTGCG CGTTCCTCGG GGTCCCGGTG CCGGCGGAGG ACTTCCCACA CGCCAACGAT GGCGAGTCGA TGCGCCGGGT CATCCGGGAC GTCGGCGGCG GGGCCGCTGG CGCCGCGACC AACTGA
|
Protein sequence | MLRLINTGLG RTGTTSLKVA LERLGYGPCY HMFDIVNDSD RLQQWEEVVC DGQRPDWKML FDGFTSVVDG PSAVYHKDIT QTFPEAKVIL TIRDSEEWYR STYDTLYQFA VRNRENPPEP GSMPARMYRF VNTMVWDGLF GGRFADKGYA IDVFRRHNEE VANSVAPGNL LTYDVRQGWQ PLCAFLGVPV PAEDFPHAND GESMRRVIRD VGGGAAGAAT N
|
| |