Gene Strop_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2182 
Symbol 
ID5058645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2470489 
End bp2471154 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID640474445 
Producthypothetical protein 
Protein accessionYP_001159011 
Protein GI145594714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.942905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.83113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGGC TCATCAATAC CGGCCTGGGC AGGACTGGCA CCACATCACT GAAGGTGGCG 
TTGGAGCGCC TCGGCTACGG ACCCTGCTAT CACATGTTTG ACATCGTCAA CGACTCGGAC
CGGCTCCAGC AGTGGGAAGA AGTCGTCTGC GACGGACAGC GGCCCGACTG GAAGATGCTG
TTCGACGGCT TCACCTCCGT CGTGGATGGG CCCAGCGCTG TCTACCACAA GGACATCACC
CAGACGTTCC CCGAGGCGAA GGTGATTCTG ACTATTCGGG ACAGTGAGGA ATGGTACCGA
AGCACGTACG ACACGCTGTA CCAGTTCGCC GTGCGGAACC GCGAAAATCC GCCGGAACCC
GGCTCCATGC CGGCCCGGAT GTACCGATTC GTGAACACCA TGGTCTGGGA TGGCCTCTTC
GGCGGACGCT TCGCCGACAA GGGCTACGCC ATTGATGTGT TCCGTCGGCA CAACGAGGAG
GTCGCCAACT CCGTAGCCCC CGGCAACCTG CTCACTTATG ACGTACGGCA GGGATGGCAG
CCGCTGTGCG CGTTCCTCGG GGTCCCGGTG CCGGCGGAGG ACTTCCCACA CGCCAACGAT
GGCGAGTCGA TGCGCCGGGT CATCCGGGAC GTCGGCGGCG GGGCCGCTGG CGCCGCGACC
AACTGA
 
Protein sequence
MLRLINTGLG RTGTTSLKVA LERLGYGPCY HMFDIVNDSD RLQQWEEVVC DGQRPDWKML 
FDGFTSVVDG PSAVYHKDIT QTFPEAKVIL TIRDSEEWYR STYDTLYQFA VRNRENPPEP
GSMPARMYRF VNTMVWDGLF GGRFADKGYA IDVFRRHNEE VANSVAPGNL LTYDVRQGWQ
PLCAFLGVPV PAEDFPHAND GESMRRVIRD VGGGAAGAAT N