Gene Strop_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2177 
Symbol 
ID5058640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2465303 
End bp2466079 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID640474440 
Producthypothetical protein 
Protein accessionYP_001159006 
Protein GI145594709 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.362241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGG TTGTTTCGCG AGATGGCACC ACAATCGCCT ATCAGCGGGC CGGGGAGGGC 
CCACCGGTCG TACTCCTGAA CGGCGCCTTC CGCGATCACA CGATTTTCGA CGCGCTCGTC
CCAGAGCTGA CCGCACACTG CACCACCTAC GTCTACGACC GCCGGGGACG GGGGCAGAGC
GGAGATTCCC CCCGGTACGC CATCGAACGC GAGATTGAGG ACCTAGCCGT CGTGATCGAG
GAGGCGGGTG GCCAGGCGGT GGTGTTCGCC GGGTCGTGCG GTGCGAACCT CGCGCTGGAG
GCGGCCCTGG CGGGTACCCC GATCACCAGA CTGGCCCTGC ACGAACCGTA CTTCCGGGTC
GGTGACCACC CGCGGCCGCC CCTCGACGCC GCCGACCGAC TTCGCGCGCT GGTCGCCGCC
GACCAACGGG GCGCGGCTGC GGAGTACTTC CTGAACGTGC TGATGGGCCT GCCGCCAGCG
GCAATTGCCC AGTGGCGGCA GGGCCCGCTC TGGGCAACGA ACGAGGCGAA TGCGCACACG
CTCGCCTATG ACGCCACTCT GTGTGGTGAC TACACCCTCC CGGTCGACCG ACTGGCCGCC
CTGCGGACTC CCGCGCTGGT CGTCAACAGC GACGGCACCA GCGACTGGCT GCGGGACGCG
GCCCAGGCGA CGGCAGCGGC GCTGCCGAAC GCCTCGGGAA GAGAGCTGCC CGGTTCCTGG
CACCGGATCG AGATGGAGAC GCTTGGCCGG GTCCTGGTCG AGTTCGCCAC GACCTGA
 
Protein sequence
MRKVVSRDGT TIAYQRAGEG PPVVLLNGAF RDHTIFDALV PELTAHCTTY VYDRRGRGQS 
GDSPRYAIER EIEDLAVVIE EAGGQAVVFA GSCGANLALE AALAGTPITR LALHEPYFRV
GDHPRPPLDA ADRLRALVAA DQRGAAAEYF LNVLMGLPPA AIAQWRQGPL WATNEANAHT
LAYDATLCGD YTLPVDRLAA LRTPALVVNS DGTSDWLRDA AQATAAALPN ASGRELPGSW
HRIEMETLGR VLVEFATT