Gene Strop_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2113 
Symbol 
ID5058576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2389567 
End bp2390799 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content73% 
IMG OID640474376 
Productglutamate--cysteine ligase, GCS2 
Protein accessionYP_001158942 
Protein GI145594645 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3572] Gamma-glutamylcysteine synthetase 
TIGRFAM ID[TIGR01436] glutamate--cysteine ligase, plant type
[TIGR03444] glutamate--cysteine ligase family protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0416635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGT CTCCGGAGGT GGACCACGGC ACGGTCCTGA CCTCGTCGGC CGCGGTCGCG 
GGCCATCTGG CCCGGATCTG CTTCAAGACC GGCCCACCCC GGTGGCTCGG CGTCGAGCTT
GAATGGACCG TGCACGACGT CGATGACCCC GCCCGCCCGG TCGGGGCCAG CCGACTGCGG
GCTGCTCTCG GGCCGCACAG CCCCCGCACC CTGGACACCA CGAGCCCCGC CCAGCCGCTG
CGGCATGGCG GCTCCGTTAC CGTCGAGCCC GGCGGGCAGG TGGAGATCTC CAGCGCAACC
CATACCTCGG TCGTCGCCCT CGTTACGGCT ACCGAAGCCG AGATCGCCCA ACTCACCGCG
CTTCTCGGGC GGGCCGGGCT GGTCCTCGGC GCCGGCGGTA TCGACGCCCA CCGGTCGCCC
CGCCCCGTGT TCGAGACCCC GCGGTACCGG GCGATGCGCC GGGTCTTCGA TCGTCGTGGC
CCGGCCGGGC GCAGGATGAT GTACAGCACC GCCGGCCTCC AGGTCTGCCT GGATTGTGGC
GAGACGGACC AGCTCGCCGA TCGGTGGGCC ACGGCGCACG CGATTGGTCC ACCGCTGGTC
GCCGCCTTCG CCACCGCCGG TCGGCACGCC GGGCGACCGA CCGGCTGGGT CTCGGCCCGG
ATGGCCGCGT GGCTCGCCAT CGACCCGGCG CGGACCCGAG CGGTGTGGAC TCCCGAGCAG
GGCGCTGCGG ACCCGATCGC CAGTTGGACG GCGTACGTCC TCGACGCCCC GCTGCTCTGC
GTGCGGGATG GGCCGGACTG GACGGCTCCG GTCGGCGTCA CCTTCGCCGA CTGGTTGGCC
GGCGCGTTGC CCCGGCCCCC CACAGTCGAC GATCTCGACT ACCACGTGAG CACGCTCTTT
CCGCCGGTGC GCCCCCGCGG TTACCTGGAG CTGCGCTACC TCGACGCGCA ACCGGAAGGT
AACTGGTCCG TGCCGGTGGC GGTGGTCGCC GCGTTGCTCT CCGAGCCGGC CGTCACCCGG
GCCGCCCGAT CGCTCGTCGG GGCGCAGGCG CAGCGGTGGA TCGCCGCTGC CCGGCACGGT
CTGCACGACA ACGCTCTCGC GGCGACGGCC GCCGACCTTC TTGATCTAGC GCTGACCGCG
TTGCCCCGGC TGGGGTTGCC GCCCGCGCTG CACGACGACA TTGACCGAGG CGTACGACGG
CGGCGGGAAG CCGCGGGAAA GAGGCGGCGG TGA
 
Protein sequence
MVASPEVDHG TVLTSSAAVA GHLARICFKT GPPRWLGVEL EWTVHDVDDP ARPVGASRLR 
AALGPHSPRT LDTTSPAQPL RHGGSVTVEP GGQVEISSAT HTSVVALVTA TEAEIAQLTA
LLGRAGLVLG AGGIDAHRSP RPVFETPRYR AMRRVFDRRG PAGRRMMYST AGLQVCLDCG
ETDQLADRWA TAHAIGPPLV AAFATAGRHA GRPTGWVSAR MAAWLAIDPA RTRAVWTPEQ
GAADPIASWT AYVLDAPLLC VRDGPDWTAP VGVTFADWLA GALPRPPTVD DLDYHVSTLF
PPVRPRGYLE LRYLDAQPEG NWSVPVAVVA ALLSEPAVTR AARSLVGAQA QRWIAAARHG
LHDNALAATA ADLLDLALTA LPRLGLPPAL HDDIDRGVRR RREAAGKRRR