| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2111 |
|---|
| Symbol | |
|---|
| ID | 5058574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2387308 |
|---|
| End bp | 2387979 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158940 |
|---|
| Protein GI | 145594643 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0727975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC GGGGTAGGTG GGTGTGGGCC GCTGTCACCA CGGTGGCTCT GGTGCTCGGC
GTGGTGGTGT GGTCGGGGGC CACCCAGGAC CGATCGCGAT CAGCGGCGCC AACGGTCGGG
GTCAGCGACG ATCCCGGGCT GTCGGTCATC GTGCCCGGCC GGCCCGGAGA GTCGGCTCGG
GTCCGCCCCG CCGACGAGGT GCCGGCGATC CCCACCGGAG CGCACAACTC GCTGGACACC
TGGTACGTCC AGATGATGAT CCCGCATCAT GAGCAGGCGC TGGAGATGTC GGAGTTGGTC
CCGAGGCGGA CCGCCAACCC GAAGGTGGCG GCGCTGGCCG AGCGGATCCG GGCCAGTCAG
GCACCCGAGA TCGAGGTGTT GCGGGCCTGG CTCGAGGCCC GCAACCTACC GGTGGAGGTT
GCCGGGCACG ACCACAGCGC AATGCGTGGC ATGCAGTCGC CGGAGGCGAT GCGCCGTCTC
GCCGGGTCTC GGGGTGCAGA GTTCGACCGA CTCTTTGTGG AGATGATGAG CGATCATCAC
GCCGGGGCTG TCGAGATGTC CATTGATCTG TTGAAGGTTG GGGCGGAGCC GGTGCTGCTG
GAGTTCGCGA ACTCGGTCGC CGTCGAGCAG AACGTCGAGA TCGGCCGGAT GCGGGAGCTG
CTCGGCCGTT GA
|
|---|
| Protein sequence | MTVRGRWVWA AVTTVALVLG VVVWSGATQD RSRSAAPTVG VSDDPGLSVI VPGRPGESAR
VRPADEVPAI PTGAHNSLDT WYVQMMIPHH EQALEMSELV PRRTANPKVA ALAERIRASQ
APEIEVLRAW LEARNLPVEV AGHDHSAMRG MQSPEAMRRL AGSRGAEFDR LFVEMMSDHH
AGAVEMSIDL LKVGAEPVLL EFANSVAVEQ NVEIGRMREL LGR
|
|---|
| |