| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2089 |
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| Symbol | |
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| ID | 5058552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2363322 |
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| End bp | 2363969 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474352 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001158918 |
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| Protein GI | 145594621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0541256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0273474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGATC CGCTGACGAT CGCCTCCGGC GTCTGCGCCG CGGGCGCCCT CGTCTCGTCC
TGGCAGCTGC ACCGCCGGGC GGTGCAGGCC GAGACGGAGA TCGCCGCCCT CCAGGCCGAA
CTTGCCGCCG AGCGCTACGC GGCCAGCCAC GACCCACTCA CCGGCCTGCC CAACCGACGA
GCCTTTCATC GGCTTGCCGC CGCCCTGCTG ACCCGGGCGG ACGGACGGCC GCTGATCGCC
GCCGTCCTCG ATCTCGACGA CTTCAAACAG ATCAACGATC GGTACGGACA CGCCGCCGGC
GACCAGGTGC TGATCAACGT CGCCCAGCGG CTCGCCGCCT TCGCCGGGGA CGACCCGGTC
GCCCGGCTCG GCGGGGATGA GTTCGCCGGG TTGCTCACCG CCCCCGAGGT CGAGCGGCGG
TGGCTTGAGC ACGCCACCCG CCGATTGCAT GACGTCCTCG CCGCACCGAT CCGGCTACAC
TGCGCAAGCG TACGAGTGAC AGCTTCCGTC GGGTTGGCAC CGGTCAGCTG TCCCGCCCAG
CTCTCCGAGG CGTTGGACCG CGCCGACGCC GCGATGTACC GGGCGAAGAG CATCGACTCG
CCCCGCCCCC GCCAGCTCCT CGATAGCGCG CGCGCCGGCG ACCGCTGA
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| Protein sequence | MPDPLTIASG VCAAGALVSS WQLHRRAVQA ETEIAALQAE LAAERYAASH DPLTGLPNRR
AFHRLAAALL TRADGRPLIA AVLDLDDFKQ INDRYGHAAG DQVLINVAQR LAAFAGDDPV
ARLGGDEFAG LLTAPEVERR WLEHATRRLH DVLAAPIRLH CASVRVTASV GLAPVSCPAQ
LSEALDRADA AMYRAKSIDS PRPRQLLDSA RAGDR
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