| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2045 |
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| Symbol | |
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| ID | 5058508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2316966 |
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| End bp | 2317922 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640474310 |
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| Product | sphingomyelin phosphodiesterase |
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| Protein accession | YP_001158876 |
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| Protein GI | 145594579 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR03395] sphingomyelin phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.664493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAC CGCAGACTCT ACTGCTTGCC GTCGTTCTGA CCGCGACGGG GCTGCTCGCC
CCCGCCGCCC CTGCTGCGGC TGCCCCAGTG CCGCTGAAGG TACTGACCCA CAACGTCATG
TTTCTACCCC AGTCCCTCTT CCCCAACTGG GGCCAGGTCA CCCGGGCCAA CCTGATCAGT
GAGGCCGACT ACATCGCCGG CCAGGACATC GTCGTACTGC AGGAGCTGTT CGACAACGAG
GCATCCGACC GGCTCAAAGA CCAGCTCGCT GCGCAGTATC CCTACCAAAC CCCAGTCCTC
GGCCGGTCGA AGTCCGGCTG GGACGCCACC CTGGGCTCAT ACTCCCACGC AACCCCGGAG
GACGGCGGAG TCACCATCCT GAGCAGGTGG CCGATCCTGG AGAAGGTCCA GTACGTCTAC
GCGGACGGCT GCGGGGCAGA CTGGTTCTCC AACAAGGGCT TTGTCTACGC ACAGCTTGAC
ATCAACAACA CGCCCGTACA TGTGGTGGGC ACTCATGCTC AAGCAGCCGA CACCGGCTGC
GCCGACGGCA CCGGGGCCCG GGTACGGGCA GCTCAGTTCG ACGAGCTCGA CGCCTTCCTG
GACGCTCGTC AGATCCCGAC GGACGAACAG GTCATCGTCG CTGGCGACCT CAACGTTGAC
CGCTACTCCA CCGAGTACGA CAGCATGCTG ACTCGACTCG ATGTCAGCGA CGCCACATTC
ACCGGCCATC CGTACTCGTG GGACGCGCAG CGCAACGACA TGGCCGACTA CAACGACGAC
CAGGACAGTC GCCAGCAGCT CGACTACGTA CTGCAGCGCA ACGGCCACGC GCGCCACGGC
TCAGGCGACA ACGAGACGCT AGCTGTCGAG GCACCGCAGT GGTGCGTGAC AAGCTGGTTC
GTCCGCTACT GCTACACCGA CTACGCCGAC CACTACCCAG TAGCGGCGAA CATCTGA
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| Protein sequence | MKRPQTLLLA VVLTATGLLA PAAPAAAAPV PLKVLTHNVM FLPQSLFPNW GQVTRANLIS
EADYIAGQDI VVLQELFDNE ASDRLKDQLA AQYPYQTPVL GRSKSGWDAT LGSYSHATPE
DGGVTILSRW PILEKVQYVY ADGCGADWFS NKGFVYAQLD INNTPVHVVG THAQAADTGC
ADGTGARVRA AQFDELDAFL DARQIPTDEQ VIVAGDLNVD RYSTEYDSML TRLDVSDATF
TGHPYSWDAQ RNDMADYNDD QDSRQQLDYV LQRNGHARHG SGDNETLAVE APQWCVTSWF
VRYCYTDYAD HYPVAANI
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