Gene Strop_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2034 
Symbol 
ID5058497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2307219 
End bp2308199 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID640474299 
Producthypothetical protein 
Protein accessionYP_001158865 
Protein GI145594568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.644155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.528766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATCTG GATGGGCACG ACGCCGCACC CGCGTACGCG GACTACTTCC ACGCTGCGCG 
CTCGCGGTGC TGGTCGCGCT GACGACGGCG CCGGCTGCCG CTGCGGCGAA GGAGCCCACC
CCGGGGCTCA GCCAGTCGAT CGCCGCCGAC CAGCCGCTCG CCACCGGTCG GGCAGAACTC
GGTGCCGGAC ACATCGACCT CGGCCCTCGC TACGTCAATG ACCGGTGGAC GCTACTGATC
CACGACGGCA CACAGGCGCA GCCGGTGTGG CGTGACCCCG ACGAGACGGT GTTGCGGGTG
TCCGACGCCG CGCTTCAGAC CGTTCCGGAC GATCCGGCGT ACGCGTTCCT CGGCGTTGAC
GCCGGCAAGC AGGTGTACGT GGTGCCGCAG GTCCAGAACC CCGACGTCGT CTGGCTCGGC
TGGAACACCC AGGACCCCCG GGTGATGCAG AGCATCGACC GTGGGGTCAC CCTCTCCTTG
CTGGGCGTGG ATGGCCCGGG AACCCTCACG ACGTACCTGC AGTCGGGGAA CTTCGCGGCC
CCAGAACCGC TGTGGCGCTC CGTCGAGCCG AAGGCACAGC CTTTCTGGGC CGAGGTCAAC
ACCCATACCC ACGCCAACTG GGTTTTCACC GCACCAGGCG TCTACCTGAT CGCGGTGCAG
GTATCCGCCA ACCTGATTGG CGGTGAGACA GTGTCAGCAA CCCGCATGTT GCGCTTCGCC
GTGGGCGACG GCACCAGCGT CGACGAGGCG TATGCCGCCA CCGCGGACGT CCCCGGGTCG
GCGGAACAGG CGTCGCCGGC CAGCGACCGT GCCGAGGATG GCAAGCCGGC CGGCGAGTCC
ACGACTCTGC TCCTCGCCGT GATGGTGGCG CTAACGGTCC TGCTCGCCAC CGGCCTGGTG
CTTCTGCTGC TGCGGGGACG CAGGGCCAAG CGGCAGGCTG AGCGAGAAGG CGGGACCTCG
CTGTCCGGAG GTGACCGTTG A
 
Protein sequence
MTSGWARRRT RVRGLLPRCA LAVLVALTTA PAAAAAKEPT PGLSQSIAAD QPLATGRAEL 
GAGHIDLGPR YVNDRWTLLI HDGTQAQPVW RDPDETVLRV SDAALQTVPD DPAYAFLGVD
AGKQVYVVPQ VQNPDVVWLG WNTQDPRVMQ SIDRGVTLSL LGVDGPGTLT TYLQSGNFAA
PEPLWRSVEP KAQPFWAEVN THTHANWVFT APGVYLIAVQ VSANLIGGET VSATRMLRFA
VGDGTSVDEA YAATADVPGS AEQASPASDR AEDGKPAGES TTLLLAVMVA LTVLLATGLV
LLLLRGRRAK RQAEREGGTS LSGGDR