Gene Strop_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2029 
Symbol 
ID5058492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2300438 
End bp2300974 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content72% 
IMG OID640474294 
Productregulatory protein, MerR 
Protein accessionYP_001158860 
Protein GI145594563 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.115977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.362141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCGCG CCGGCACCGG GCCGGCACGA GGAGGATGGC ACCGTGGGGC TGTTGACGAT 
CGGCGCGTTC GCCCGAGCGG CGCGGCTGAC ACGAAGGCGC TGCGCCGGTA CGACAAGGTG
GGGCTGTTGC CGCCCACGGC GGTCGATTCC GAGTCCGGCT ACCGGTTCTA CGACCCGGAA
CAGTTGGCTC ACGCCTGGCT GATCGCCCAG TTACGCCGCA TCGGCATGCC GCTGGCCGAG
ATTCGTACCG TGTGCGACCT GAGGCCCGAC GCGGCGGCCC GAGCGGTCAG CACCTACTGG
CAACAGGCCA CCGCCGACAC CGCGACCCGC GCCCACCACG TCGCCAGACT CATCGAGCAC
CTGTCCCGAC CGCCCTTGCC GGAGACCCGC TACCTGCTCT GCTCCGACGG CCTGTCCGCC
GTCGTCAGCC GCGGCGATCT ACACACCGCC CTCGCCGAAG CCGGCGAACC CGAGCCGACC
GCGCAACGCC CGGCGCGGCC TGCTCCTGTT GCCCAACGGC GGGGCGGTGC GCAGTGA
 
Protein sequence
MVRAGTGPAR GGWHRGAVDD RRVRPSGAAD TKALRRYDKV GLLPPTAVDS ESGYRFYDPE 
QLAHAWLIAQ LRRIGMPLAE IRTVCDLRPD AAARAVSTYW QQATADTATR AHHVARLIEH
LSRPPLPETR YLLCSDGLSA VVSRGDLHTA LAEAGEPEPT AQRPARPAPV AQRRGGAQ