Gene Strop_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2011 
Symbol 
ID5058474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2281418 
End bp2281825 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content64% 
IMG OID640474277 
Productregulatory protein, ArsR 
Protein accessionYP_001158843 
Protein GI145594546 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.184845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0811991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATAC GCAACCATGT AGGTAGCAAG AGATATCCTG TGCTCGTGCA CAACACGCTG 
CCGGACTTCG AGATGCCCAA CGAGGAGCGA GTCCACCTGG CCGCCGAAAG CTTCCGCCTG
CTCGCCGACC CGACCCGCAT CAAGATCCTC TGGGCGTTGT TACAGGGTGA ATCCTCGGTG
GCTTGCCTGG CCGACCTCGT CGGCGCCGCC CCAACAGCCG TCAGCCAGCA CCTGGCCAAA
CTCCGCCTGG CCGGCCTGGT TCACGGACGC CGCGAAGGCA CGTTCGTCTA CTACACCGCC
GCCGACATCC ATGTTCGCAA CCTGCTCGAC GAAGCCCTTC ATCACGCGGA CCAGGACCTG
CCCAGCCATC GAGCGCATCA TGACAGCCGG CCGACAGCGT CAAGGTAG
 
Protein sequence
MQIRNHVGSK RYPVLVHNTL PDFEMPNEER VHLAAESFRL LADPTRIKIL WALLQGESSV 
ACLADLVGAA PTAVSQHLAK LRLAGLVHGR REGTFVYYTA ADIHVRNLLD EALHHADQDL
PSHRAHHDSR PTASR