Gene Strop_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1938 
Symbol 
ID5058401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2211065 
End bp2212009 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID640474212 
Producthypothetical protein 
Protein accessionYP_001158778 
Protein GI145594481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.162876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0969358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC GCGCACGGGA CGCGGGGCTG CTGGCTCGGT GGGTGACCGC CGACGAGGCC 
TACGGCAAGG ACAGCAAGTT CCGGCTGTGG CTGCAGACCC GGCGCATGGG CTACGTCTTG
GCCGTGGCCT GCAACCAGAA GATCCCGACC GACGGCGGCA GCGCCCGCGC CAACGAACTG
GCCGCCGCGG CCCCTGCCCC GGTGTCCTGT GACGAGACCC CGATCCGGGT CGGTGCCCGC
AAGGTCAGGA AGTACCTCCT GGTCGCCTGC ACCCACCTTT ACACCTGGTA TCTGCTCGGT
GGCCGCAGCC TCGACATGTT CGAGGTGTTC GTCCTGCCGG ACCTGACGGG TGTCATCGTG
CACGACCGCT ACCAGAACTA CGACGCGAAG ATCTTCGCCC ACCTGGTGCA CCAACTGTGC
GTGGCGCACC TGATCCGCGA CTGCCAGGAC GCCGCCGAGA CCTACCCCGA GGCACACTGG
CCGATCCAGA TCCGCCAGGC GCTGCAAGGA CTCGTGCACG CCGCGAACCT CGCCCGCGCC
CAGAACCTGA AGGCGATTCC CGCCGAGATC GCGGACCCGC TGATCGACGC CTACCGGCAC
GGCGTCCGCA TCGGCCTCAA AGACGTCGCC CGGGTGCCCG GCCGGAAACA GCCGAAACAC
CGGGCACTGC TGGAAGACCT GCGCGACCGC GAGGCCGACA TCCTGCGGTT CACCACCGAC
CTGCGGATCC CACCCACCTC GAACCAGGCC GAACGCGACC TGCGGCCGGC GAAGACCCAG
CAGAAGATCT CTGGACAGCT CACCAGCGAG AAGATCACCG AACACCGGTA CGCCATCCGC
GGCTACGTCT CCACCGTGAC CAAACACGGC GCGGACGTCA TGACCGCAAT CCGCGACGCC
ATCCTCGGCC GGCCCTGGAC ACCACCCGCC TGGACACCCG GCTAA
 
Protein sequence
MLRRARDAGL LARWVTADEA YGKDSKFRLW LQTRRMGYVL AVACNQKIPT DGGSARANEL 
AAAAPAPVSC DETPIRVGAR KVRKYLLVAC THLYTWYLLG GRSLDMFEVF VLPDLTGVIV
HDRYQNYDAK IFAHLVHQLC VAHLIRDCQD AAETYPEAHW PIQIRQALQG LVHAANLARA
QNLKAIPAEI ADPLIDAYRH GVRIGLKDVA RVPGRKQPKH RALLEDLRDR EADILRFTTD
LRIPPTSNQA ERDLRPAKTQ QKISGQLTSE KITEHRYAIR GYVSTVTKHG ADVMTAIRDA
ILGRPWTPPA WTPG