Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1938 |
Symbol | |
ID | 5058401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2211065 |
End bp | 2212009 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474212 |
Product | hypothetical protein |
Protein accession | YP_001158778 |
Protein GI | 145594481 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.162876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0969358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCGCC GCGCACGGGA CGCGGGGCTG CTGGCTCGGT GGGTGACCGC CGACGAGGCC TACGGCAAGG ACAGCAAGTT CCGGCTGTGG CTGCAGACCC GGCGCATGGG CTACGTCTTG GCCGTGGCCT GCAACCAGAA GATCCCGACC GACGGCGGCA GCGCCCGCGC CAACGAACTG GCCGCCGCGG CCCCTGCCCC GGTGTCCTGT GACGAGACCC CGATCCGGGT CGGTGCCCGC AAGGTCAGGA AGTACCTCCT GGTCGCCTGC ACCCACCTTT ACACCTGGTA TCTGCTCGGT GGCCGCAGCC TCGACATGTT CGAGGTGTTC GTCCTGCCGG ACCTGACGGG TGTCATCGTG CACGACCGCT ACCAGAACTA CGACGCGAAG ATCTTCGCCC ACCTGGTGCA CCAACTGTGC GTGGCGCACC TGATCCGCGA CTGCCAGGAC GCCGCCGAGA CCTACCCCGA GGCACACTGG CCGATCCAGA TCCGCCAGGC GCTGCAAGGA CTCGTGCACG CCGCGAACCT CGCCCGCGCC CAGAACCTGA AGGCGATTCC CGCCGAGATC GCGGACCCGC TGATCGACGC CTACCGGCAC GGCGTCCGCA TCGGCCTCAA AGACGTCGCC CGGGTGCCCG GCCGGAAACA GCCGAAACAC CGGGCACTGC TGGAAGACCT GCGCGACCGC GAGGCCGACA TCCTGCGGTT CACCACCGAC CTGCGGATCC CACCCACCTC GAACCAGGCC GAACGCGACC TGCGGCCGGC GAAGACCCAG CAGAAGATCT CTGGACAGCT CACCAGCGAG AAGATCACCG AACACCGGTA CGCCATCCGC GGCTACGTCT CCACCGTGAC CAAACACGGC GCGGACGTCA TGACCGCAAT CCGCGACGCC ATCCTCGGCC GGCCCTGGAC ACCACCCGCC TGGACACCCG GCTAA
|
Protein sequence | MLRRARDAGL LARWVTADEA YGKDSKFRLW LQTRRMGYVL AVACNQKIPT DGGSARANEL AAAAPAPVSC DETPIRVGAR KVRKYLLVAC THLYTWYLLG GRSLDMFEVF VLPDLTGVIV HDRYQNYDAK IFAHLVHQLC VAHLIRDCQD AAETYPEAHW PIQIRQALQG LVHAANLARA QNLKAIPAEI ADPLIDAYRH GVRIGLKDVA RVPGRKQPKH RALLEDLRDR EADILRFTTD LRIPPTSNQA ERDLRPAKTQ QKISGQLTSE KITEHRYAIR GYVSTVTKHG ADVMTAIRDA ILGRPWTPPA WTPG
|
| |