| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1917 |
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| Symbol | |
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| ID | 5058379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2189688 |
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| End bp | 2191394 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640474190 |
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| Product | virulence factor MVIN family protein |
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| Protein accession | YP_001158757 |
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| Protein GI | 145594460 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.731846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.293184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAACC CGGCCCCGTC CGCCGCCGCC GGCCGAGTAG CCGGGGCCGC CGCGCTGATC
GCCGTACTCA CCGTGGTCAG TCGGCTTGCC GGCTTCGGTC GTACCGCCGT GTTCACCTGG
ACGCTCGCGC CCACCGATCT CGGTGGCACG TATGTGGTGG CGAACGCCGC TCCGAATGTG
ATCTTCGAGA TGGTCGCGGG TGGCGCCCTC GCCAGCCTGG TCGTGCCGCT GCTGGCCGCC
CCGGTGGCGG CGGCGGACCG CGGGGCGGTG GCCCGGACCA CCGGGGCGCT GCTCACCTGG
GTTCTTGCCC TGCTGGTGCC ACTCGCGCTG GCGGTGGCGC TGCTGGCCGG CCCGATCGTG
GGGCTGCTGG GCGGCGGACT CGACCCGGCC CAGCAGGCCA GCGGCGAGCG GATGCTGCGG
GTGTTCGCCC CGCAACTGCC GCTGTACGGG GTCGGCATCG TGCTCACCGG GGTTCTCCAG
GCACACCGCC GGTTCGCCTG GCCAGTGATC GCCCCACTGC TGTCCAGCCT TACCGTCATC
GCGGTCTACC TGGGCTTCAC CGTCGCAGAG GGGCGGTTGG CCAGTGTGGC GGGCGTCAGT
CGAGGGGGCG AACTGCTGCT GTCGTGGGGA ACGACCGCCG GAGTGGCGGT GCTGTCCCTG
TCGCTGCTGG TTCCGTTCCG CCGGCTGGGA TACGCACCGG TGTTCGGCTT CCGCTTTCCC
GCCGACGCCC GTGCCCGGGT CCGCGGACTC GCGGTCGCCG GCGCGGTAAC GGTGACCGCG
CAGCAGGTAG CGCTCGTGGT GAGCCTGAAC CAGGTCTCCT ACGGTGCGGT CAGCAACCTC
GGTGCGTTCC AGCTCGCCCA GACGGTCTAC CTGCTGCCGT GGGCGGTACT GGCGGTGCCA
CTGGCGGTGG CCGCCTATCC GAGCCTGGCC GCCGCCGGGT CCGTGGGGGA CGAGGCGGCG
TACCGGGCGA CGCTGGCCCC GGCCGCCCGC GGAGTACTGC TGCTCAGCTG CCTCGGTGCG
GCCGTCCTGG TCGGTACGGC CGTGCCGGTT GGGTACTTCT TCTTCGTCGG CGACGCGGCC
GCGACCGCCG CTGCCGGGAT CGCCGGCTTC GCACCCGGCC TGGTCGGCTA CGGGCTCTTT
GCCGTGTTGA GCCGTGCCCT CTACGCGCGG GGGCAGGCGC GGGCAGCCGC CGGCGCGATC
GCCGTCGGCT TTCTCGTGGT GCCCGCCGCG GTGTTGCTGT TCAGCGCCGT GCTGCCGCTG
CGGGACCGGG TGCCGGCGGT CACCCTGGCC AATTCGGTGG GGATGGTGGC GCTCGGTGCC
CTGCTGGTGC TCGCCGTCCG ACGGACAGCC GGCGCCACTG CACTCGCCGG ATTCGGCCGT
GCCGGGGCAG CCGGCCTGAC CGGCGGGGGG CTGGCGGCGT TGGTGGGTTG GGCGGTGGCG
CGGTCGCTGC TGGCGGCGAC CGACGGCACC CCGAGCGCAC CAGTGGCCCT CGTACAGGGC
ATGCTGTCCG GTGTCGTGGT CGGTGTCGTG TTCCTCGCGG TGGTCTGGGT ACTGGACCGG
CCGGACGTAC GACCGTTGCT CGTCGGAGCG TTGCGGCGTC TTGGGCTGAC CCGTGGGAGG
CGGTCGCCGA ACCCGGGCTG CGGGCAGCGA AAGGACGACG GTGTCCCCCC GGAGCGGGGC
GACGGGAAGG AGACGGTGTC CCGGTGA
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| Protein sequence | MTNPAPSAAA GRVAGAAALI AVLTVVSRLA GFGRTAVFTW TLAPTDLGGT YVVANAAPNV
IFEMVAGGAL ASLVVPLLAA PVAAADRGAV ARTTGALLTW VLALLVPLAL AVALLAGPIV
GLLGGGLDPA QQASGERMLR VFAPQLPLYG VGIVLTGVLQ AHRRFAWPVI APLLSSLTVI
AVYLGFTVAE GRLASVAGVS RGGELLLSWG TTAGVAVLSL SLLVPFRRLG YAPVFGFRFP
ADARARVRGL AVAGAVTVTA QQVALVVSLN QVSYGAVSNL GAFQLAQTVY LLPWAVLAVP
LAVAAYPSLA AAGSVGDEAA YRATLAPAAR GVLLLSCLGA AVLVGTAVPV GYFFFVGDAA
ATAAAGIAGF APGLVGYGLF AVLSRALYAR GQARAAAGAI AVGFLVVPAA VLLFSAVLPL
RDRVPAVTLA NSVGMVALGA LLVLAVRRTA GATALAGFGR AGAAGLTGGG LAALVGWAVA
RSLLAATDGT PSAPVALVQG MLSGVVVGVV FLAVVWVLDR PDVRPLLVGA LRRLGLTRGR
RSPNPGCGQR KDDGVPPERG DGKETVSR
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