| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1913 |
|---|
| Symbol | |
|---|
| ID | 5058375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2184743 |
|---|
| End bp | 2186500 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640474186 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_001158753 |
|---|
| Protein GI | 145594456 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0988612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.166083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGAAG AGCTACGCAT CACCGGACTG GGTGTCATCG AGGACACGAC GCTGCCGCTG
ACCGGCGGTA TGAACGTGAT CACCGGTGAG ACCGGTGCGG GTAAGACCAT GGTGGTGACC
GGTCTCGGCC TACTCTTTGG CGGGCGCGCC GACGCCGGGC GGGTGCGGGC CGAGCCCGGC
CGCGCCGTGG TCGAGGGGCG GCTACGGCTG GCCGGAAGGG CGGCGGAGAC CGTGTGTGCT
CGCGTCATCG ACGCGGGCGG TGAGCCGGAC GAGGACGGTT CGGTGTTGCT CAGCCGCACC
GTCACCACAG AAGGCCGCTC TCGTGCCCAT CTCGGCGGCC GGAGCATGCC GGTGTCGATG
CTTGGCGAGG TGGGTGAGCA GGTGCTCGCG GTGCACGGCC AGTCCGACCA ACTGCGGTTG
CTGCGCCCGG CCGAGCAGCG CGCCGCGCTC GACCGGTTCG CCGGTCCGGA GCACGAGAAG
CTGCTCGACG CGTTGCGCGA GGTGTATTCG CGGTGGCGTT CAGTGGTGGA CGACCTGGCC
GGCCGGCGCC GAAACGCACG GGAGCGGAAT CGGGAGGCCG ACCTGCTGCG CCTCGGGCTC
GACGAGATCA CGCAGGTTGA CCCGCAGCCG GGCGAGGACG ACGAGCTCAA GGCGGAGGCA
CAGCGGCTGG AGCACGCCGA GGGGCTGCGG ACCGCGGCGC GGCTGGCCCA GCAGTGCGTG
GCCGGGGGGA TGGAGGCCGC CGAGGACACT CCGGATGCCA CGACGCTACT CGGCACCGCC
CGCCGTACGT TGGATGGGCA GTCCGGCACC GACCCTGCCC TGGGGGAGCT GGCAACGCGC
TTGGAGGAGG CGGCGACCCT GGTCGCCGAT GTCTCCGCGG AGTTGTCGAC GTACCTGGCC
GGGCTCGACG CTGATCCGGC GCGGCTGCAG GCTGTCTACG AGCGGCGGGT CGCGTTACGT
GCGCTGACTC GCAAGTACGC CGACGACACC GATGGGGTGA TCGCCTGGGC TGAGCGGGCG
CGGGCCCAAC TGTCGGAGCT GGATTCCTCG GATGAGTTGC TCGACGAGTT GGACCGGGAG
GTGGCTCGGC TGGCCGGCGA GGTGGCCGAC CTGGCGGGTC GGGTGTCGGT GGCGAGGCAG
GAGGCGGCGA CCCGGTTTGC GGCGCAGGTC ACCACCGAGC TGGCGGGGTT GGCCATGCCG
CACTCTCGGG TCGAGGTGGG GGTACTGCCC CGCCCGGTTG GCAAGTCCGA ACCGGGCCTT
GCGGTCAACG GCGTCGAGGT CGGGATCGGG CCGGACGGCG GCGATGAGGT GGAGCTGCGC
CTGCTGGCAC ATCCGGGTGC GCCGGCACTG CCGTTGCAGC GGGGCGCCTC CGGCGGTGAG
CTGTCCCGGG TGATGCTCGC CATCGAGGTG GTCTTCGCCG GCTCGGGCGG CCCGCCCACG
CTCGTCTTCG ACGAGGTTGA CGCCGGGGTC GGTGGCCAGG CTGCGGTGGA GATCGGCCGT
CGGCTGGCCC GGCTGGCTCG TAGCCACCAA GTGCTGGTCG TTACCCATCT GCCCCAGGTC
GCTGCGTTCG CTGACCGGCA CCTGGTGGTG GCGAAGGACA CCGGCGGTGC GGTGACGACC
AGTGGGGTGC GAGTGGTCGA GGACACCGAA CGGGCGCGGG AACTCGCTCG CATGCTGGCC
GGATTGCCGG ATTCGGATCT GGGCATCGCG CACGCCGAGG AGTTACTGGC AGTGGCCGCG
CGGGAGCGGC GAGCGTAA
|
|---|
| Protein sequence | MLEELRITGL GVIEDTTLPL TGGMNVITGE TGAGKTMVVT GLGLLFGGRA DAGRVRAEPG
RAVVEGRLRL AGRAAETVCA RVIDAGGEPD EDGSVLLSRT VTTEGRSRAH LGGRSMPVSM
LGEVGEQVLA VHGQSDQLRL LRPAEQRAAL DRFAGPEHEK LLDALREVYS RWRSVVDDLA
GRRRNARERN READLLRLGL DEITQVDPQP GEDDELKAEA QRLEHAEGLR TAARLAQQCV
AGGMEAAEDT PDATTLLGTA RRTLDGQSGT DPALGELATR LEEAATLVAD VSAELSTYLA
GLDADPARLQ AVYERRVALR ALTRKYADDT DGVIAWAERA RAQLSELDSS DELLDELDRE
VARLAGEVAD LAGRVSVARQ EAATRFAAQV TTELAGLAMP HSRVEVGVLP RPVGKSEPGL
AVNGVEVGIG PDGGDEVELR LLAHPGAPAL PLQRGASGGE LSRVMLAIEV VFAGSGGPPT
LVFDEVDAGV GGQAAVEIGR RLARLARSHQ VLVVTHLPQV AAFADRHLVV AKDTGGAVTT
SGVRVVEDTE RARELARMLA GLPDSDLGIA HAEELLAVAA RERRA
|
|---|
| |