Gene Strop_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1890 
Symbol 
ID5058349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2158153 
End bp2159085 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID640474160 
Productacetylglutamate kinase 
Protein accessionYP_001158730 
Protein GI145594433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.259504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGTGC GGCACCGCAA CCTTGGACGG AAGGAAGGTT CGGGCATGAG TGTCACCGCG 
GATCTCACCG GCGCTCAGGC CAAGGCCGCC ACCCTGATCG AGGCGCTGCC GTGGCTGGCC
CGTTTCGCGG GTTCGTGCGT CGTGGTCAAG TACGGCGGCA ACGCCATGGC CGACCCAGAG
CTGCGGCGGG AGTTCGCCGC GGACATGGTC TTTCTCCGCT ACGCGGGCCT GAAGCCGGTC
GTGGTGCACG GGGGCGGCCC GCAGATCTCG GTCATGCTGG ACCGGCTCGG CATCGACAGC
GAGTTCCGGG GTGGGCTGCG GGTCACCACC CCGGAGGTGA TGGACGTGGT CCGGATGGTG
CTCCTGGGCC AGGTCGGCCG GGAACTGGTC GGGCTGATCA ACGCGCACGG TCCGTTCGCC
ATGGGGCTCT CCGGCGAGGA CGGGGGTCTG TTCACCGCGG TCCGACGGCA GGCGTACGTC
GATGGGCAGC CGGTCGACAT CGGCCAGGTC GGCGATGTGG AGTCGGCGGA CATCTCGGCG
GTGACCCACC TGCTCGAGGC CGGCCGGATC CCGGTGCTCT CGACGGTGGC CCCGGATGCG
GACGGCGTGC CGCACAACCT CAACGCGGAC ACCGCCGCCG CGGCCCTGGC GATCGCCCTG
CGGGCGCGCA AGCTGGTCGT CCTGACCGAT GTGCCGGGCC TGTACGCGAA CTGGCCGGAC
CGGTCCAGCC TGGTCAGTGA GGTCACCGCG GACGAACTGG CGAAGCTGCT GCCGTCCCTG
GAGTCGGGGA TGGTCCCCAA GATGGAGGCG TGCCTGCGGG CGGTGCGCGG GGGCGTGCCC
GCCGCGCATG TCGTGGACGG GCGGGTCGCG CACTCCGTGT TGCTAGAGAT TTTCACCTCG
GAAGGCTTCG GAACCATGGT GACTCCCGGA TGA
 
Protein sequence
MLVRHRNLGR KEGSGMSVTA DLTGAQAKAA TLIEALPWLA RFAGSCVVVK YGGNAMADPE 
LRREFAADMV FLRYAGLKPV VVHGGGPQIS VMLDRLGIDS EFRGGLRVTT PEVMDVVRMV
LLGQVGRELV GLINAHGPFA MGLSGEDGGL FTAVRRQAYV DGQPVDIGQV GDVESADISA
VTHLLEAGRI PVLSTVAPDA DGVPHNLNAD TAAAALAIAL RARKLVVLTD VPGLYANWPD
RSSLVSEVTA DELAKLLPSL ESGMVPKMEA CLRAVRGGVP AAHVVDGRVA HSVLLEIFTS
EGFGTMVTPG