Gene Strop_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1876 
Symbol 
ID5058335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2145078 
End bp2145779 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID640474146 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_001158716 
Protein GI145594419 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC CGCTCGGCTG GCTGCTCGAC GCGCAGGTGA GCTTCGCCGG CTCGCCCGTG 
CTGGTCCGCG AGATCGTCGG CAACGTCTTC GGCCTGGCCG CCGCGGTGTT CGGCCTGCGC
CGGGTGGTGT GGGCCTGGCC GGTCGGCATG ATCGGCAACG CGTTGCTGTT CACCGTCTTC
CTCGGCGGAG CGTTCACCAC CCCGCAGGCA CACGACCTCT ACGGCCAGGC CGGCCGGCAG
GTCTTCTTCT TCGGGCTCGG GCTCTACGGC TGGTGGCGTT GGTCGCGTAA CCGTCGCCGG
GGTGGCGACG GTACTGCCGC CGCGGTGGAA CCCCGCTGGG CTACCGGGCG GGAGCGGCTC
GGCTTACTGG CGGCCGCGGT GGCCGGCACC GCCGTCAGCT ATCCGGTCCT CGCCGCCCTG
GGGTCGTGGG GTCCGCTGCC GGATGCCTGG ATCCTGACCG GCAGCCTGCT CGCCACATAC
GGCATGGCCC GGGGGTATGT GGACTTCTGG CTGATCTGGA TCGCCGTCGA CGCGGCCGGA
GTGCCGCTGC TCCTGCGTGG CGGGTACTAC CCATCGGCCG TCATGTACCT CGTCTACGGC
GCATTCTGCG TCTGGGGGCT CGCCGCCTGG TGGCGGACGT CGCGCGCCTC CCGTTCGGAG
CTGGCACCGA TCTCGTCGAA CTATGCGGAG GCTGTGGCGT GA
 
Protein sequence
MTGPLGWLLD AQVSFAGSPV LVREIVGNVF GLAAAVFGLR RVVWAWPVGM IGNALLFTVF 
LGGAFTTPQA HDLYGQAGRQ VFFFGLGLYG WWRWSRNRRR GGDGTAAAVE PRWATGRERL
GLLAAAVAGT AVSYPVLAAL GSWGPLPDAW ILTGSLLATY GMARGYVDFW LIWIAVDAAG
VPLLLRGGYY PSAVMYLVYG AFCVWGLAAW WRTSRASRSE LAPISSNYAE AVA