| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1851 |
|---|
| Symbol | |
|---|
| ID | 5058310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2116843 |
|---|
| End bp | 2117331 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640474121 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001158691 |
|---|
| Protein GI | 145594394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.689571 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCTG AGTACGCCAA GTCGCTGGGC GCCCGCCTGC GCTCCATTCG CCAGCAGCAG
GGCCTGTCCC TGCAGGGCGT AGAGGAAAAG TCCAACGGAC GGTGGAAGGC CGTCGTGGTC
GGCTCGTACG AGCGCGGCGA CCGAGCCGTC ACCGTGTCCC GCCTCGCCGA ACTGGCCGAC
TTCTACCGTG TTCCCGTCTC CGAGCTACTG CCCGACGGCA GTGGCGTCCG CCACGAGCCC
ACCAGCAAGA TCGTGCTGGA CCTCGAGCGG CTCTACGACG AGGCCTCGGA GGACCTCGCC
TACGTCGCCC GATACGCCCG CGCGATTCAG CAGCAGCGCG GCGACTACAA CGGCCGGGTG
CTGTCGATCC GCGCCGATGA CCTGCGCGCC CTGGCGATCG TCTACGACGC CTCGCCGTCC
GGCCTGATCG AGCGGCTGAA CGAGCACGGC GTCCTCGTCG CCGACCCCCG GGCGTTCTTC
GCCTCCTGA
|
|---|
| Protein sequence | MPSEYAKSLG ARLRSIRQQQ GLSLQGVEEK SNGRWKAVVV GSYERGDRAV TVSRLAELAD
FYRVPVSELL PDGSGVRHEP TSKIVLDLER LYDEASEDLA YVARYARAIQ QQRGDYNGRV
LSIRADDLRA LAIVYDASPS GLIERLNEHG VLVADPRAFF AS
|
|---|
| |