| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1836 |
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| Symbol | |
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| ID | 5058295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2103518 |
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| End bp | 2105089 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640474106 |
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| Product | hypothetical protein |
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| Protein accession | YP_001158676 |
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| Protein GI | 145594379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG CCACGGCTCC GGCGGCGTCG TCCGGCCGCG CCGCCGGGCA GCCGGACGAG
GCAGAGCGCC GAGACAGTGT GCGCAGCGGT GTCGCTGGGC TGATCGGCGC CGCCACCAGC
GGTCTCTTCG GCTTTCTCCT TGCGGTGGTG ATAACCCGCG GCTACGGCCC GGCGGGCTCC
GGTGTCTTCT TCGCCGCGAT CGGGGTGATC ACGGTAGCTA CCGCGGTGTG CACGCTGGGT
GCCGAGACCG GTCTGCTGTG GGCGCTGCCG CGCCGCCGCT CGGCCGCGGG GCGGGGGGAT
GCCGCCCGGG TACTGCCGGT GGCCCTCCTC CCGCCGTTCC TGGTTGCCGC CATGGTCGCG
CTGGCCGGGT TGCTCGCTGC CGACTCACTG GCGCCCCGGG TGTTCGGCCC TGCCGCGGGG
CCGGAGCTGC TGGCGGTGAG CTTCGCCGCC GTCCCGGTGG TTGTCCTCCT GACGCTGCTG
CTCGCCGCCC TGCGATGCGT CCGGCCGATT CGGGCGTACG TGTCGGTGCA GTTCTTTCTC
CTGCCGGTGG CCCGGCCGGC ACTGGTCGGC GTCGCTGTCC TGGTCGGCGG TGGCCTGGTT
GCCGGGGTGT CCGCCTGGCT GGTTCCGGCC GCACTGGCCC TGCTGGTCTG CCTGGCCCTG
GTGGCGGGGC CGTTGCGCAT CGGGCGTGGC GCCGGGTTAC GTCCCGGACG GCGGGACTGG
TCGACCTTCT GGCGGTTCGC GCTGCCCCGG GCCGTCTCGG CCGCCATCGA CGCCGGCAAC
CTGTGGATTG GGGTGCTGTT GACCTCGGCG CTCGCCGGGG CGGAGGAGGC CGGTGTGTTC
GGTGCCGTCG GCCGGTACGT CCTCGCCGGC CAGCTCGCCG TGCAGGGGCT GCGGGTGACG
GTGTCTCCCC GGTTGTCCCG GCTGCTCGGC GCGGGCCGGA CGGCTCTCGC GGCGGCCGTG
CACCGGCAGT TGACCACCTG GGGACTGGTG CTTTCCTGGC CGGTCTACCT GCTGCTCGCC
GTCTTCGGGG TGGGATTCCT GGAACTGTTC GGGCCCGGCT TCACCGCCGG GACCACCGCG
ATGACCGTCC TCGCTCTGGC CATGCTGGCG CAGACCGGGG TGGGTAACGT GCAGAGCCTG
CTGCTGATGG GGGGCCGCAG CGGCCTGCAC CTGACTGCCA CCCTGGGCGG GCTGCTGGTG
ACCGTCTCGC TCGGCCTGGT GTTGATCCCC GGGCACGGCG CCACCGGCGC GGCGATGGCC
TGGGCCGCCG GCATCCTCAC CGAGAACCTC ACCGCCGTGA CGTGCGCATG GCTCGTGGTG
CGGCACCCGT TGGTGGACGG TGCGATGGTG CGGGCGGCGG TGATCACCGT CGCCGTGGTG
GGCGGCGCCG CCGCGGTGGG CGTGCTGGTC GGCGGGCGGG GCATGCCGGG CCTCCTGGCG
GCGGTGGCGG TGCTGGCCGT CGGTGCTGCC GGGGCACTGC CCCGAATACG GCCCGGTATC
CAGGCGAGTC TGAGGCAGAT CCGTGGGCGG GAGTCGGCCA CCGCCGGCCT ACCCGATCAG
AAGGACAGGT GA
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| Protein sequence | MTAATAPAAS SGRAAGQPDE AERRDSVRSG VAGLIGAATS GLFGFLLAVV ITRGYGPAGS
GVFFAAIGVI TVATAVCTLG AETGLLWALP RRRSAAGRGD AARVLPVALL PPFLVAAMVA
LAGLLAADSL APRVFGPAAG PELLAVSFAA VPVVVLLTLL LAALRCVRPI RAYVSVQFFL
LPVARPALVG VAVLVGGGLV AGVSAWLVPA ALALLVCLAL VAGPLRIGRG AGLRPGRRDW
STFWRFALPR AVSAAIDAGN LWIGVLLTSA LAGAEEAGVF GAVGRYVLAG QLAVQGLRVT
VSPRLSRLLG AGRTALAAAV HRQLTTWGLV LSWPVYLLLA VFGVGFLELF GPGFTAGTTA
MTVLALAMLA QTGVGNVQSL LLMGGRSGLH LTATLGGLLV TVSLGLVLIP GHGATGAAMA
WAAGILTENL TAVTCAWLVV RHPLVDGAMV RAAVITVAVV GGAAAVGVLV GGRGMPGLLA
AVAVLAVGAA GALPRIRPGI QASLRQIRGR ESATAGLPDQ KDR
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