| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1831 |
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| Symbol | |
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| ID | 5058290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2096919 |
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| End bp | 2097746 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640474101 |
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| Product | shikimate-5-dehydrogenase |
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| Protein accession | YP_001158671 |
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| Protein GI | 145594374 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.535911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCATCTG AGCGCGTGCG GGCGGCGGTG GTCGGTGACC CGATCGCGCA CTCCCTCTCC
CCGGTGATCC ACAACGCCGG CTACGCCGCG GTCGGCCTGC ACGACTGGTC GTATACCCGC
ATCGAGTGTG CCCAGGCGCA GCTGCCGGCC CTGGTTGCCG GCCTGGGCCC GGAGTGGGCG
GGGCTCTCGG TCACCATGCC GGGCAAGGAG GCGGCGCTCG CGGTCGCCAC GACGGCGTCG
CCGGTCGCGG TCGCTGTCGG CGCGGCCAAC ACCCTGGTAC GCCGGCCCAA CGGCTCCTGG
CACGCGGACA ACACCGATGT CGCCGGCATG GTGGAGGTGC TGACCGCCGC CGGGGTTCGT
CCGGGGTCGA CGCTGACGGT GCTCGGCGCC GGCGGTACCG CCCGGGCGGC GGTGGCCGCG
GCGGCGGCGC TGCGCGCCCG GACGGTGACG GTGGTGGCCC GGCGGAAGGC CGCGATCGCC
GACCTGCGTC CGGTGGCCGA GACGGTGGGC GTGTCGCTGA CCGGAGTTCC CTGGGCCGAC
GCTGCTGCGG CCTGCTCCGC CGACGTGGTG ATCTCAACCG TGCCGGCCGG GGCCGCCGAC
CCATTGGCCA CGGCGGTGGT GTGGCGGCCC ACCACTGTGC TCTTCGACGC CCTCTACGAC
CCCTGGCCGA CCTCGCTCGC GTCCGCCGCG CGGACTGCCG GCTGCCGGGT CTGCTCTGGT
CTCGATCTGC TGCTGGCCCA GGCGGTCGGC CAGTTCGAGC AGTTCACCGG GGTACCGGCG
CCGCGTGCGG CGATGGCCGA CGCGCTCACC GCGGCTCGGG CTGGCTGA
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| Protein sequence | MSSERVRAAV VGDPIAHSLS PVIHNAGYAA VGLHDWSYTR IECAQAQLPA LVAGLGPEWA
GLSVTMPGKE AALAVATTAS PVAVAVGAAN TLVRRPNGSW HADNTDVAGM VEVLTAAGVR
PGSTLTVLGA GGTARAAVAA AAALRARTVT VVARRKAAIA DLRPVAETVG VSLTGVPWAD
AAAACSADVV ISTVPAGAAD PLATAVVWRP TTVLFDALYD PWPTSLASAA RTAGCRVCSG
LDLLLAQAVG QFEQFTGVPA PRAAMADALT AARAG
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