| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1823 |
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| Symbol | |
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| ID | 5058282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2086167 |
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| End bp | 2087561 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640474093 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001158663 |
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| Protein GI | 145594366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000162964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.991228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCC TCTCGGTCCA TCAGGTCCGC CACCGCTATC TCATCCTGCT CGGCCTGCGC
TGGCTGCCGG TCGGCCTGCT GGTTCCGGTC TTCGTCCTGC TGATGCAGGA GCGGGGCCTC
ACCCTTGCCG AGATCGGCAT GGCGTTCGCG GCCCAGGGTG TCCTCGTCCT CGCGCTCGAG
TTGCCGACCG CCGGGCTCGC CGACGCCGTG GGACGCCGGC CGGTGCTGGT GCTCGCCGCG
GTGGTCAACC TCGCCTCCGT GGCGCTCTTC GTCGTGGCCG ACTCGTTCGC CCTACTGGTG
GCGGTGTGGG CGTTGCAGGG GGTCTATCGG GCGCTGGACA GCGGCCCGCT CGAGTCCTGG
TTCGTGGACA GCACCCTCGC CGCCGACCCT GAGGCCGAGT ACGAGCGGGG CCTGAGCCAG
GGCGGGACGG CGGTCGGCGT CGCCATGGCG GCCGGTGCCC TGCTCAGCGG CGGGCTGGTC
GCGTTCGGCC CGGTCGGCCC GTTCAGCGCG TTGACCATGC CGATCGTGGC CATCGTGGTG
TTGCAGGTCG TCGGGCTGGT GGCCCTCCTC GCCCTGCTGC GCGAGCGTCG TCCCACCGCC
GGGTCGTCGG CGCTACGCGA GTCGATCGCG GAGGCCCCCC GGATGATCGG CCAGGCGATG
GGGCTGCTGC GCCGCTCCCG GGTGCTGCTC GCCCTGCTCT CGGTCGAGCT CTTCTGGGGC
TTCGGCATGG TCACTTTCGA AGCTCTCCTG CCGGTCCGAC TCGCCGAGGT GCTCGGCGAC
GCCGATCGGG CCGGGGCGCT GCTCGGGCCG GCGACCATGG TGGCCTGGCT CGCGAATGCC
GGCGGCGCGG CGGCGACCCC GCTGCTCACC CGGCGACTGG GCGCCGCGCC CGCCGCGGCG
CTGCTGCGGA TCGCGCAGGG CGTCACCGTG GTCGGGATGG CGCTGCTCGC CGGTCCGGTC
GGCGTGCTGG TCGCCTTCGT CGTGTGCTAC GTCGTGCATG GCGCCTCGAA CCCGTTGCAC
ATGGGGCTGG TGCACCGACA GGTCGACGGG CCGTACCGGA CCAGTGTGGT GTCCCTGAAC
TCGATGGTGT CCATGCCCGC CGGTGCCGCC GGGGGGATCG TGCTCGGCCT GGTCGCCGAC
CGTGCCGGCG TCAGCGTCGC GATGCTGGTC GGCGCGGTCG TGCTCGTGAT TGCCGCGCCG
CTGTACCTGC CCGCCTGGCG GGCGAGCCGG GACGGTTCTC CCGCCCCGGT CGGTGCGCCA
ACGGCCGCCG CCTCCCCCGA GCCCCCGGAA CCGGCGACCC AGCCCGACAC CTCGGCGCCG
GTCAGTGGGC AGCCCGGCGT GCCCCCGGCT CGCGACGGTG ATCCGACAAC CGGCGCGGGC
GCGGCACGGC GCTGA
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| Protein sequence | MATLSVHQVR HRYLILLGLR WLPVGLLVPV FVLLMQERGL TLAEIGMAFA AQGVLVLALE
LPTAGLADAV GRRPVLVLAA VVNLASVALF VVADSFALLV AVWALQGVYR ALDSGPLESW
FVDSTLAADP EAEYERGLSQ GGTAVGVAMA AGALLSGGLV AFGPVGPFSA LTMPIVAIVV
LQVVGLVALL ALLRERRPTA GSSALRESIA EAPRMIGQAM GLLRRSRVLL ALLSVELFWG
FGMVTFEALL PVRLAEVLGD ADRAGALLGP ATMVAWLANA GGAAATPLLT RRLGAAPAAA
LLRIAQGVTV VGMALLAGPV GVLVAFVVCY VVHGASNPLH MGLVHRQVDG PYRTSVVSLN
SMVSMPAGAA GGIVLGLVAD RAGVSVAMLV GAVVLVIAAP LYLPAWRASR DGSPAPVGAP
TAAASPEPPE PATQPDTSAP VSGQPGVPPA RDGDPTTGAG AARR
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