| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1769 |
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| Symbol | |
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| ID | 5058228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2025754 |
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| End bp | 2026965 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640474040 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_001158610 |
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| Protein GI | 145594313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTCG ACATCGCCCG CATTCGGGCC GCGTACCCTG CCCTGGCCGA GGGCCACGTC
CACTTCGACG GTGCCGGAGG CACCCAGACC GCCGCGCCGG TGATTTCCGC GGTGGCCGAG
ACCATGGGTG CGGCGCTCGG CAACCGCAGC GGCGGCAACC TTCCCGGCCG ACGCTCACTG
GAGCTGGTGG CCGCCGCCCG TACGGCCGTG GCCGACCTGC TCGGCGCGGT TCCGGAGGGG
GTGGTGCTGG GCCCGAGCGC GACGGCGCTC ACCTACACCC TGGCCCGCGC CCTCGGGGCG
ACGTGGCGAC CAGGAGACGA GGTGGTGGTG TCCCGACTCG ACCACGACGC CAACGTCCGG
CCATGGATCC AGGCAGCCGA GGCGGCGGGC GCAACCGTAC GGTGGGCCGA GTTCGATGTG
CACACCGGTG AGCTGCCGGC CGGCCAGTAC GGCAATCTGG TCAACGAGCG GACCCGGTTG
GTAGCGGTCA CCGCCGCCAG CAATGCGATC GGCACGATGC CCGAGGTGGC GGCGATCGCC
AAGGCGGCCC ACGCCGTCGG AGCGCTGGTC TGCGTGGACG GTGTGCACTC GGTGCCGCAC
GGTCCGACCG ACCGCACCGC GTTGGGCGCT GACTTCCTGG TCACCAGCGC CTACAAGTGG
TCGGGTCCCC ACGTGGCCGC GGTGGCGGCG GATCCGGCGT GCTGGGAGTA CCTGTACCCG
GCGAAGCTGC GTCCCGCCGC CGACTCCGTA CCCGACCGAT TCGAGTACGG CACGCCCAGC
TTTCCGCTGT TGGCCGGGGT GGCCGTCGCC GTGGACCACC TCGCCGGGCT GGACCCGACG
GCCACCGGAA GCCGGCGGGA GCGGCTGCGC ACCAGCCTGA ACGCGGCTCG CGCGTACGAG
GAGGGGCTTT TGGCGCGACT GCTCGACGGT CTCGCCGCGC TGCCCGGGGT CACCGTGCTC
GGCTCGCCGG CCCGCCGCTG CCCCACGGTC TCGTTCCGGT TGGCCGGCCG GTCTCCGGCC
GAAACCCAGG CGGCGCTCGG CGCGGCGGGG CTCTGCCTCT CCGCCGGTGA CTACTACGCC
TACGAGTACT TCCAGACGTT GGGGCTACGG GACAGCGGCG GGGCGGTACG CGTCAGCTTG
TACCACTACA ACACTGTCAC CGACGTGGAT CGGCTGCTCG ACGAGATGGC GAGGCTCTTC
CCCGACCGCT GA
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| Protein sequence | MPFDIARIRA AYPALAEGHV HFDGAGGTQT AAPVISAVAE TMGAALGNRS GGNLPGRRSL
ELVAAARTAV ADLLGAVPEG VVLGPSATAL TYTLARALGA TWRPGDEVVV SRLDHDANVR
PWIQAAEAAG ATVRWAEFDV HTGELPAGQY GNLVNERTRL VAVTAASNAI GTMPEVAAIA
KAAHAVGALV CVDGVHSVPH GPTDRTALGA DFLVTSAYKW SGPHVAAVAA DPACWEYLYP
AKLRPAADSV PDRFEYGTPS FPLLAGVAVA VDHLAGLDPT ATGSRRERLR TSLNAARAYE
EGLLARLLDG LAALPGVTVL GSPARRCPTV SFRLAGRSPA ETQAALGAAG LCLSAGDYYA
YEYFQTLGLR DSGGAVRVSL YHYNTVTDVD RLLDEMARLF PDR
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