Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1758 |
Symbol | |
ID | 5058217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2012194 |
End bp | 2013798 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640474029 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001158599 |
Protein GI | 145594302 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.396799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCGAA TCGGCGCGGC GTCCCCGGAC GCCATCGTCG TCGGAGCGGG CCACAACGGC CTGGTAGCCG CCAATCTGCT CGTTGACGCC GGCTGGGATG TGCTCGTGCT GGAGGCCACC GGGGCGCCCG GTGGCGCGAT CCGCTCGGCC CAGGTGACCG CTCCCGGCTA CCTGAGCGAC CTCTACAGCT CCTTCTACCC CATCGGTTAC GCGTCGCCGG TTCTGCGTCG GCTGGGCCTG GACCAGTACG GGCTACGGTG GCGGCATGCC CCGGACGTGT TGGCGCACCT GCTGCCGGAC GGGCGGGCGG CGGTACTCAA CCGCGACCCG GCGGCCACCG CCGCCTCCCT GGAGACCTTC GCGGCCGGTG ACGGGGAGCG GTGGCTGGCG GCCTACGGCG ACTGGTGCCA GGTAGCCGGC CCGATGCTGG ACGCCATCAC CACCCCCTTC CCGCCGGTGC GCAGCAGTCT CGCGCTGGTG CGCCGGCTGC GGGTCGCCGG AGCGCTGCGT CTGGCCCGCC GGTTGGTGAC ACCGGTACGC CGGCTCGGCG ACGAACTTTT CACCGGAGCG GGCGGGACAG CCCTGCTCGC CGGCTGCGCG CTGCACACCG ACCTGGCCCC TGAGGAGGTC GGCTCCGGGG CGTACGGGTG GCTGTTGGCG ATGCTCGGCC AGCAGGTCGG TTGGCCGGTG CCGGACGGCG GCGCCCAACG GATCACCGAC GCCCTGGTGG CCCGGCTCGT CGATCGGGGC GGCCAGATCC GCTGCGGCGC GCGGGTGGAT CGAGTGCTGA CCGCCCGGGG CCGGGCGATG GGCGTCCGGG CCGAGGATGG CGTGCTCTGG CGGGCCCGCC GTGCGGTGCT CGCCGACGTG CCGGCGCCCG CACTCTACCT GGATCTTGTC GGGGTCGATG TCTTGCCGCC GCGGCTGGCG GCGGATTTGG CCAACTTCCG ATGGGACGGC TCGACGCTGA AGGTCGACTG GGCGCTGTCC GCACCGGTAC CGTGGCGGAA TCGGGCAGTC GCCACCGCCG GCACCGTACA CCTCGGCGCC GACCTCGACG GGCTGACCGG CTATGCGGCG GCGCTGGCCC GAGGGGAGGT CCCCCGGGAC CCGTTCCTGC TGGTCGGGCA GATGACCGTC GCCGACCCCA GCCACTCGCC ACCCGGTACC GAGTCGTTGT GGTCGTATAC CCACCTACCA TTCCGACGGC GGTGGCGGGT CGAGGAGATC GCCGCGCAGG TGCAGCGGAT GGAGCAGGTG CTGGAGGAGG CCGCCCCGGG CTTCCGTGCG CTGGTGGTGG GCCGGCACGT GGCGGGACCG GCAGACCTGG AGTCGGGCGA CCCGAGCCTG GTCGGCGGAG CGCTCGGTGG TGGTACGTCC GCCGCCCACC AGCAGCTCTT CTTCCGCCCG ATCCCCGGAC TCGGCCGCGC CGACACCCCC GTTGACCGGC TCTTTCTGGC CAGTTCGTCG GCGCACCCCG GCGGTGGCGT CCACGGCGCG CCCGGTGCGA ACGCGGCGCG GGCGGCGTTG GCCCGCGACG CCGCGCTCAC CGGTGGCGTG TACGCGGCGG CGGTCAGCGC CGCGCAGCGC GCGGTCTACC GCTGA
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Protein sequence | MSRIGAASPD AIVVGAGHNG LVAANLLVDA GWDVLVLEAT GAPGGAIRSA QVTAPGYLSD LYSSFYPIGY ASPVLRRLGL DQYGLRWRHA PDVLAHLLPD GRAAVLNRDP AATAASLETF AAGDGERWLA AYGDWCQVAG PMLDAITTPF PPVRSSLALV RRLRVAGALR LARRLVTPVR RLGDELFTGA GGTALLAGCA LHTDLAPEEV GSGAYGWLLA MLGQQVGWPV PDGGAQRITD ALVARLVDRG GQIRCGARVD RVLTARGRAM GVRAEDGVLW RARRAVLADV PAPALYLDLV GVDVLPPRLA ADLANFRWDG STLKVDWALS APVPWRNRAV ATAGTVHLGA DLDGLTGYAA ALARGEVPRD PFLLVGQMTV ADPSHSPPGT ESLWSYTHLP FRRRWRVEEI AAQVQRMEQV LEEAAPGFRA LVVGRHVAGP ADLESGDPSL VGGALGGGTS AAHQQLFFRP IPGLGRADTP VDRLFLASSS AHPGGGVHGA PGANAARAAL ARDAALTGGV YAAAVSAAQR AVYR
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