Gene Strop_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1758 
Symbol 
ID5058217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2012194 
End bp2013798 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content74% 
IMG OID640474029 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001158599 
Protein GI145594302 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.396799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGAA TCGGCGCGGC GTCCCCGGAC GCCATCGTCG TCGGAGCGGG CCACAACGGC 
CTGGTAGCCG CCAATCTGCT CGTTGACGCC GGCTGGGATG TGCTCGTGCT GGAGGCCACC
GGGGCGCCCG GTGGCGCGAT CCGCTCGGCC CAGGTGACCG CTCCCGGCTA CCTGAGCGAC
CTCTACAGCT CCTTCTACCC CATCGGTTAC GCGTCGCCGG TTCTGCGTCG GCTGGGCCTG
GACCAGTACG GGCTACGGTG GCGGCATGCC CCGGACGTGT TGGCGCACCT GCTGCCGGAC
GGGCGGGCGG CGGTACTCAA CCGCGACCCG GCGGCCACCG CCGCCTCCCT GGAGACCTTC
GCGGCCGGTG ACGGGGAGCG GTGGCTGGCG GCCTACGGCG ACTGGTGCCA GGTAGCCGGC
CCGATGCTGG ACGCCATCAC CACCCCCTTC CCGCCGGTGC GCAGCAGTCT CGCGCTGGTG
CGCCGGCTGC GGGTCGCCGG AGCGCTGCGT CTGGCCCGCC GGTTGGTGAC ACCGGTACGC
CGGCTCGGCG ACGAACTTTT CACCGGAGCG GGCGGGACAG CCCTGCTCGC CGGCTGCGCG
CTGCACACCG ACCTGGCCCC TGAGGAGGTC GGCTCCGGGG CGTACGGGTG GCTGTTGGCG
ATGCTCGGCC AGCAGGTCGG TTGGCCGGTG CCGGACGGCG GCGCCCAACG GATCACCGAC
GCCCTGGTGG CCCGGCTCGT CGATCGGGGC GGCCAGATCC GCTGCGGCGC GCGGGTGGAT
CGAGTGCTGA CCGCCCGGGG CCGGGCGATG GGCGTCCGGG CCGAGGATGG CGTGCTCTGG
CGGGCCCGCC GTGCGGTGCT CGCCGACGTG CCGGCGCCCG CACTCTACCT GGATCTTGTC
GGGGTCGATG TCTTGCCGCC GCGGCTGGCG GCGGATTTGG CCAACTTCCG ATGGGACGGC
TCGACGCTGA AGGTCGACTG GGCGCTGTCC GCACCGGTAC CGTGGCGGAA TCGGGCAGTC
GCCACCGCCG GCACCGTACA CCTCGGCGCC GACCTCGACG GGCTGACCGG CTATGCGGCG
GCGCTGGCCC GAGGGGAGGT CCCCCGGGAC CCGTTCCTGC TGGTCGGGCA GATGACCGTC
GCCGACCCCA GCCACTCGCC ACCCGGTACC GAGTCGTTGT GGTCGTATAC CCACCTACCA
TTCCGACGGC GGTGGCGGGT CGAGGAGATC GCCGCGCAGG TGCAGCGGAT GGAGCAGGTG
CTGGAGGAGG CCGCCCCGGG CTTCCGTGCG CTGGTGGTGG GCCGGCACGT GGCGGGACCG
GCAGACCTGG AGTCGGGCGA CCCGAGCCTG GTCGGCGGAG CGCTCGGTGG TGGTACGTCC
GCCGCCCACC AGCAGCTCTT CTTCCGCCCG ATCCCCGGAC TCGGCCGCGC CGACACCCCC
GTTGACCGGC TCTTTCTGGC CAGTTCGTCG GCGCACCCCG GCGGTGGCGT CCACGGCGCG
CCCGGTGCGA ACGCGGCGCG GGCGGCGTTG GCCCGCGACG CCGCGCTCAC CGGTGGCGTG
TACGCGGCGG CGGTCAGCGC CGCGCAGCGC GCGGTCTACC GCTGA
 
Protein sequence
MSRIGAASPD AIVVGAGHNG LVAANLLVDA GWDVLVLEAT GAPGGAIRSA QVTAPGYLSD 
LYSSFYPIGY ASPVLRRLGL DQYGLRWRHA PDVLAHLLPD GRAAVLNRDP AATAASLETF
AAGDGERWLA AYGDWCQVAG PMLDAITTPF PPVRSSLALV RRLRVAGALR LARRLVTPVR
RLGDELFTGA GGTALLAGCA LHTDLAPEEV GSGAYGWLLA MLGQQVGWPV PDGGAQRITD
ALVARLVDRG GQIRCGARVD RVLTARGRAM GVRAEDGVLW RARRAVLADV PAPALYLDLV
GVDVLPPRLA ADLANFRWDG STLKVDWALS APVPWRNRAV ATAGTVHLGA DLDGLTGYAA
ALARGEVPRD PFLLVGQMTV ADPSHSPPGT ESLWSYTHLP FRRRWRVEEI AAQVQRMEQV
LEEAAPGFRA LVVGRHVAGP ADLESGDPSL VGGALGGGTS AAHQQLFFRP IPGLGRADTP
VDRLFLASSS AHPGGGVHGA PGANAARAAL ARDAALTGGV YAAAVSAAQR AVYR