Gene Strop_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1743 
Symbol 
ID5058202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1997514 
End bp1998239 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID640474014 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_001158584 
Protein GI145594287 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.962948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.902716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGA AGCTGCGTTC GTTCGGCATG AGCGACCGTG GGCTGATCCG GAGTGGGAAC 
CAGGACGCCC TGTACTCAGG TAGCTGGCTC GTCGCCGTCG CCGATGGCAT GGGCGGGATG
GCTGCTGGTG ATCTTGCCAG CTCCATGGCG ATCAGTTCGA TTGCTCCACT CGACGTGGCG
ACCCCGGAAG ATGAGCTGGT CGCCGCATTG CAGCGGGCGA TCGAGGCGGG GACCGCGCGA
ATCCGGCAGG CCGTCAGGGA GGATCCGGAG CGCGAGGGCA TGGGTACCAC GCTGACCGCC
CTGCTCCTTG CCCGATCGGG CAGCTGCCTC GCGCTGGCCC ATGTCGGTGA CTCCCGGGCG
TACCTGTTCC GCGAGGGCGT GCTCAAACAG ATCACTCGGG ACGACACGTT CGTGCAGCTC
CTCGTTGACC AGGGGGTCAT CACCCCGGAC GAGGCGAGTA GCCATCCGCG GCGAGCGGTC
GTGACCCAGG CGTTGCAGGG CGAGGAGGTC TCCCCGGCCT ACGCGACGAT GGTGCCCTGG
GCCGGCGACC GGTGGTTGCT GTGTAGCGAT GGGCTGTCGA ACGTGGTCCG TCCGGAGACG
CTCACTGAGG TGCTCGCCCA ATATCCCGAC CGGACCGAGT GCGCCCAAAA GTTGATCGAC
CTGGCGCTGC ACGCGGGGGG CCCGGACAAC GTCACCGCCG TCGTCGCCGA TCTGGTGGCG
GAGTGA
 
Protein sequence
MTLKLRSFGM SDRGLIRSGN QDALYSGSWL VAVADGMGGM AAGDLASSMA ISSIAPLDVA 
TPEDELVAAL QRAIEAGTAR IRQAVREDPE REGMGTTLTA LLLARSGSCL ALAHVGDSRA
YLFREGVLKQ ITRDDTFVQL LVDQGVITPD EASSHPRRAV VTQALQGEEV SPAYATMVPW
AGDRWLLCSD GLSNVVRPET LTEVLAQYPD RTECAQKLID LALHAGGPDN VTAVVADLVA
E