Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1743 |
Symbol | |
ID | 5058202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1997514 |
End bp | 1998239 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474014 |
Product | protein phosphatase 2C domain-containing protein |
Protein accession | YP_001158584 |
Protein GI | 145594287 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.962948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.902716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGA AGCTGCGTTC GTTCGGCATG AGCGACCGTG GGCTGATCCG GAGTGGGAAC CAGGACGCCC TGTACTCAGG TAGCTGGCTC GTCGCCGTCG CCGATGGCAT GGGCGGGATG GCTGCTGGTG ATCTTGCCAG CTCCATGGCG ATCAGTTCGA TTGCTCCACT CGACGTGGCG ACCCCGGAAG ATGAGCTGGT CGCCGCATTG CAGCGGGCGA TCGAGGCGGG GACCGCGCGA ATCCGGCAGG CCGTCAGGGA GGATCCGGAG CGCGAGGGCA TGGGTACCAC GCTGACCGCC CTGCTCCTTG CCCGATCGGG CAGCTGCCTC GCGCTGGCCC ATGTCGGTGA CTCCCGGGCG TACCTGTTCC GCGAGGGCGT GCTCAAACAG ATCACTCGGG ACGACACGTT CGTGCAGCTC CTCGTTGACC AGGGGGTCAT CACCCCGGAC GAGGCGAGTA GCCATCCGCG GCGAGCGGTC GTGACCCAGG CGTTGCAGGG CGAGGAGGTC TCCCCGGCCT ACGCGACGAT GGTGCCCTGG GCCGGCGACC GGTGGTTGCT GTGTAGCGAT GGGCTGTCGA ACGTGGTCCG TCCGGAGACG CTCACTGAGG TGCTCGCCCA ATATCCCGAC CGGACCGAGT GCGCCCAAAA GTTGATCGAC CTGGCGCTGC ACGCGGGGGG CCCGGACAAC GTCACCGCCG TCGTCGCCGA TCTGGTGGCG GAGTGA
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Protein sequence | MTLKLRSFGM SDRGLIRSGN QDALYSGSWL VAVADGMGGM AAGDLASSMA ISSIAPLDVA TPEDELVAAL QRAIEAGTAR IRQAVREDPE REGMGTTLTA LLLARSGSCL ALAHVGDSRA YLFREGVLKQ ITRDDTFVQL LVDQGVITPD EASSHPRRAV VTQALQGEEV SPAYATMVPW AGDRWLLCSD GLSNVVRPET LTEVLAQYPD RTECAQKLID LALHAGGPDN VTAVVADLVA E
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