Gene Strop_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1678 
Symbol 
ID5058137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1914335 
End bp1915189 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content73% 
IMG OID640473950 
Producthypothetical protein 
Protein accessionYP_001158520 
Protein GI145594223 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCGG ATTACCAGCA AGAGTTCGTC GAGGTTGACG GGGCCCGCCT CGGTCTACAG 
ATCTATCCGG AGCCGGCGGA GACGGCCGAC GCCCCGCTGG TGCTGATCTC CCCCGCCATG
GGCGTACCCG CGCGGTACTA CCGACCGTTC GCCACTGCGC TCCGCGCCGG CGGGCTCGCC
GTCGCGGTCG CCGATCTCCG CGGCACCGGA GCGAGCACAC CGCGCCCGAG CCGCGGCTGC
CGCTACGGGT ACGCGGAGTT GACCACCGAC GTCGGCGCGG TGCTGGCGGC ATTGAAGGAA
CGCCGGAACG GCCGACGCAC CCTCGTGCTC GGACACTCCC TGGGCGGCCA GGCGGCCCTG
CTACACCTGG CGCTGCAACC CGGACACGAC GTGGACGCCC TGGCCCTGGT CGCCGTCGGG
CTGCCCTTCT GGCGCACCTA TCCGGCCGGA CCACGGGGTT ACGGCGTCCT CCCGTTCACC
CAGACGGTCG CCGCCACCAC CCGGCTACTC GGGGTCTGGC CCGGCTGGGG CTTCGGCGGC
CGGCAGGCGC GCGGGGTGAT CCGGGACTGG GCCTACACCG CACGCACCGG CCGCTTCCCG
CACCTGGACA ACGTGGACGC CGAGGCGGCG CTGCGCGACC TCCGCACGCC CGTGCTGGCG
GTCAGCGTGG ACAACGACGA GTACACCCCG CACGAGACCC TCGACCACCT CTGCGGCAAG
CTCGCCAGCG CTCCCATCAC CCGCGAGCGG CACCGGGCCG AGCCGGCCGG CAGCCACCTC
AACCACTTCA GCTGGGCACG CACCGCAACG AGCCCGCTGG CTGCTCGAAT CGCCCAGTTC
GCGGCCAAGG AGTAG
 
Protein sequence
MNADYQQEFV EVDGARLGLQ IYPEPAETAD APLVLISPAM GVPARYYRPF ATALRAGGLA 
VAVADLRGTG ASTPRPSRGC RYGYAELTTD VGAVLAALKE RRNGRRTLVL GHSLGGQAAL
LHLALQPGHD VDALALVAVG LPFWRTYPAG PRGYGVLPFT QTVAATTRLL GVWPGWGFGG
RQARGVIRDW AYTARTGRFP HLDNVDAEAA LRDLRTPVLA VSVDNDEYTP HETLDHLCGK
LASAPITRER HRAEPAGSHL NHFSWARTAT SPLAARIAQF AAKE