| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1650 |
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| Symbol | |
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| ID | 5058109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1879883 |
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| End bp | 1882267 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473923 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001158493 |
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| Protein GI | 145594196 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.315022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.343942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCC AAGGTCGAAT GACCATCCCG GGCGCCGATG CCACGACCGT GGTCGTGGGT
GTCGACGGTG CCGGCCGGAG CCGGCGGCTT CGAGATCTCG CCGCCGCACT CGACTGTCCG
GCGCGCTGGG TGACGCTGCC CAGCAGCGAT GCGGTTCTCG ACCTGGTACT GACGGAGGCC
CGGGCTGAGG GCGCCGTGGT GATCGTCGAC GATGCTCACC ACGGGCACCC GTCCAGCTGG
CGTGCTCTGA CCGCGGCCGC GCGTGTTGGC CAGGCAATGC TGATCGCACG GCGGCCAATA
GTCCGTGCCG CGGAGCTAGC TGACCTGGAC CAGGTCGTCG CGGCAGCCGG CACGGTCGAC
CAGCTCGGGC CATTGGATGC CGCCGGTGTC GCCGCGGTCG TCGCCGAAGC GGGCCTAGCT
GAGCCCGACG AGGCCACGAT CGAGGAGATC CTCACCGCGT CGCGTGGGAT GGCCGCGATA
GCCGCGTCCC TGGCCGCCGC GACGTCCCAG GGCTCGGTCC CCGCCGCATT GCAGGCCCGG
GTACAGCGCC GCCTCGCGGG TCTTCCTGCC GACGGCGTGG CGGTGGCACA GGTGCTTGCG
CTATTGCTGG ACGTCCCAGA TTCCGTGGTT GCCAGGGCTA CCGGGGTGAC CTTGGCGACG
GTCGCCGATA CCAGCAACGT CCTGCAAGAA CTTGGCATGA TCGCGCCTGG TTCGGCTTCG
CTGATCCCGG CCGTCGCAGC GGCGATCCTG GCCGACTTGC CCGTGATGGT ACGGCGGCAG
CTGCATGACC GGGTGGCCAC AGCGCTCCTG GGCTCCGGCA CTGACCCACT ACTGGCCGCA
GTCCGGCTGC GGCGAGCTGG TGTCCGGACA CCAACGGCAG CAGTCGCCTA CGCGCATGCT
GCTGATCACC TGCGATTCCG CGATCCCGAT GCCGCAGTGT CCTGGTACGA CGCCGCGGCC
GAGGCAGGCG CACCGCCGGC GGCTGTTGCG GTGGGCCGGG CCGAGGCGGC CACGCAGCTC
GGGATACCGG TGGATCTGAC CGGCGTTGGT GGTGAGCCGG CACGGCTGGC CATCGTGGGG
GCCGCCATCG CTGCGCAACA GGGGCGATGG GACAGAGCAG CAGAGGCACT GGCCGATGTC
GACCAGCCAG GTGCGGCCCT GGCAGCCGTG GCCTGGGCCG CGACTGGTCA TCTCGAACGT
GCTGGCGATG CCGCCGGTCG CACCCGCACC GAGTCCAGCC GACGGACGCC GGAGGCCCTC
GCCCGGCTGG CCGAGGCCGC GGCGAGCCTC GCCGATCCGG AGGCCATGTT GCCCCTCCTG
ATCGAGTCTG CTGAGGCCGC CCAGCGCCTA CCACCCGACG TCGTGTTGCC CGACTCGCCG
CACGCGCTCG GCGCCCTCGT CGCCGGACTG ACCGGTGATA CCTCCACCGC AGAGCGACTG
CTCCACGCCG GGATGGCCGC GGGCGTCGGT GGCCCGGTGA CCATCCGACG ACACCAGCTG
CTCCTGGCGT TCACCCGGAT GCGAACGGGC CGTTACGACA CCGCGGCTGC GGAGCTGGTG
CCAGGGCCGT ACCCAACTGC CCGGGACCAG TTGCTCACCG CCGCGCTCAC GGCGGGGATG
GCCCGCCGTA GTGGTGACGT GGCGCGAATG CGCGAGGCAT GGAACGGGGT GGAGACGCAG
CTGGCGCGAC GCACGGTGGA CCTCTTCGTC ATCGAGGTCC TGGAGGAGCT GGTGGTGGCG
GCGGCGCGGC TACGCCGGAT GGTGCGAGCT GAGCCCGTGA TGGACGTACT CGACGATCTC
GTCGCACGCG CCGGGCATCC GCCGACGTGG GTTGTCGCGG TGGGCTGGAT TCGGGTACAG
GTCGCCGTCG CCCTCGAGGA CACGGCTACG GCCGCCACGG TGGCCGGTGA GCTGACCAGG
ACCGCTGCCC TCGCCGGACC ACGCCAGCGC GCGCAGGGCG CCGCGGCAGT GGCCTGGGCC
GATGTACTCG CGGGCACGGT GGATATCGAC CGGGTCTGCT CGGTCGCCGA TGACCTGGCG
ACCCATCAGC TGCCCTGGGA TGCCTCACGG CTGGTGGGCC AGGCGGCGAT TCGCACCACG
GATGCGACGG CGGCACGGCG AATGTTGGAG CACGCACGCG GCTTGTCCGT TACGGAGGTC
GGCGGAGGCG AGCAGCGCGG GCGGGCTGGG GTGCTGTCCG ATCGCGAGAT TGTGGTCGGG
CGCATGGTGC TTGAGGGGCG CACCCAACGG GAAATCGGAT CCCATCTGTA TCTGTCGCCG
AAGACAGTCG AACACCACGT GGCGCGGATG CGGACCAAAC TGGACGCCTC CAGCCGAGCC
GAGTTCCTCG CCGCCCTGCG GGAACACCCG GGGGTTGTCG GCTGA
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| Protein sequence | MQAQGRMTIP GADATTVVVG VDGAGRSRRL RDLAAALDCP ARWVTLPSSD AVLDLVLTEA
RAEGAVVIVD DAHHGHPSSW RALTAAARVG QAMLIARRPI VRAAELADLD QVVAAAGTVD
QLGPLDAAGV AAVVAEAGLA EPDEATIEEI LTASRGMAAI AASLAAATSQ GSVPAALQAR
VQRRLAGLPA DGVAVAQVLA LLLDVPDSVV ARATGVTLAT VADTSNVLQE LGMIAPGSAS
LIPAVAAAIL ADLPVMVRRQ LHDRVATALL GSGTDPLLAA VRLRRAGVRT PTAAVAYAHA
ADHLRFRDPD AAVSWYDAAA EAGAPPAAVA VGRAEAATQL GIPVDLTGVG GEPARLAIVG
AAIAAQQGRW DRAAEALADV DQPGAALAAV AWAATGHLER AGDAAGRTRT ESSRRTPEAL
ARLAEAAASL ADPEAMLPLL IESAEAAQRL PPDVVLPDSP HALGALVAGL TGDTSTAERL
LHAGMAAGVG GPVTIRRHQL LLAFTRMRTG RYDTAAAELV PGPYPTARDQ LLTAALTAGM
ARRSGDVARM REAWNGVETQ LARRTVDLFV IEVLEELVVA AARLRRMVRA EPVMDVLDDL
VARAGHPPTW VVAVGWIRVQ VAVALEDTAT AATVAGELTR TAALAGPRQR AQGAAAVAWA
DVLAGTVDID RVCSVADDLA THQLPWDASR LVGQAAIRTT DATAARRMLE HARGLSVTEV
GGGEQRGRAG VLSDREIVVG RMVLEGRTQR EIGSHLYLSP KTVEHHVARM RTKLDASSRA
EFLAALREHP GVVG
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