| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1644 |
|---|
| Symbol | |
|---|
| ID | 5058103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1873278 |
|---|
| End bp | 1874279 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640473917 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158487 |
|---|
| Protein GI | 145594190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0675353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCCGG TAACTCACCG GCGCCACCGC ACAGCTGTCT TCTCGACCTC CCGCATCCCC
GCAGCTTCCC CGGCGTCGGT GCCCGCCTAC GCGGATTCGG GGGACCACGG GCGGGCCACG
GTGTCGCTAC GCTACGGCCG TGCTGTTGGC GTAGCCAACC AACCCGGGGG GATCGACGTG
TCACAGAACC AGGCCGATCA GCAGACTGCC GAGCAGCGGA CCGGAGCTGA TGCCTCCACT
GTGGATGTGT CGGTGCCGCA CTCGGCACGG GTGTGGAACT ACTGGTTGGG CGGCAAGGAC
AACTTCGCGT CGGACCGGGC GGCCGGCGAC CAGGTTCGAG CGATCTTCCC GGAGATCGTC
GAGGCCGCTC GTTACTCCCG GGCGTTCCTA CGTCAGGCCG TGACCTACCT CGCCGCGGAG
GCGGGCATCC GCCAGTTCCT CGACGTCGGC ACCGGCCTGC CGACCGCCGA CAACACCCAT
CAGGTTGCCC AGCGGATCGC GCCGCAGGCC CGGGTCGTCT ATGTCGACAA CGATCCGATG
GTCCTCGCGC ATGCCCGGGT GCTGCTGACC AGTGACCCGG CGGGTGCCAC CCAGTATCTC
AACGCCGACC TGCATGATCC AGAGCGGGTC ATCCGGGAGG CCCGGGCAAC GCTGGACCTC
AGCGAGCCGG TCGGCTTGAT GATGTTGGGG GTGATGGGGC ATGTCGCGGA CCCTGCCCAG
GCGCGAGACG CCGTACGCGC CCTGGTCTCG TCCCTGCCGT CGGGCAGCTT CCTGACGATG
TCCGACGGCA CGGCCACGAG TGAGCGGGTG ATCGAGTCCC ATCGGCAGTA CAACGAGAGC
GGTGCGGCGC CGTACCACCT GCGCGAGGTC GCGGACTTCA CCGCCTTCTT CGACGGCCTC
GACCTGGTCG AGCCGGGGGT CGTGCCCCTG GGACGCTGGC GACCGGAGAA TGGCTCGCTG
ATGGTCGTGG ACGGCTACTG CGGGGTCGCC CGCAAGCCCT GA
|
|---|
| Protein sequence | MAPVTHRRHR TAVFSTSRIP AASPASVPAY ADSGDHGRAT VSLRYGRAVG VANQPGGIDV
SQNQADQQTA EQRTGADAST VDVSVPHSAR VWNYWLGGKD NFASDRAAGD QVRAIFPEIV
EAARYSRAFL RQAVTYLAAE AGIRQFLDVG TGLPTADNTH QVAQRIAPQA RVVYVDNDPM
VLAHARVLLT SDPAGATQYL NADLHDPERV IREARATLDL SEPVGLMMLG VMGHVADPAQ
ARDAVRALVS SLPSGSFLTM SDGTATSERV IESHRQYNES GAAPYHLREV ADFTAFFDGL
DLVEPGVVPL GRWRPENGSL MVVDGYCGVA RKP
|
|---|
| |