| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1603 |
|---|
| Symbol | |
|---|
| ID | 5058062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1824038 |
|---|
| End bp | 1825027 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640473877 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158447 |
|---|
| Protein GI | 145594150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGC AGGCTGTTTC GGCGCCCTCC GACATCTTGA CATTCGTCCT CTCCGGAGTG
GTAGCTGTGC TGCTCACTCG GGCGTATCTT CACGCGACCG GCTTCCCGCG ATTCGACGCT
GGAAGCCTAC GCATCGCGCA CGTGCTCTGG GGTGGTCTGT TGCTGACCGT AGGCTTTGGT
GTCGTGCTGG TATTCCTCGG CAGCAGGGCG CGCTTCTTCG GCGCGATCCT CGGCGGGATC
GGGTTCGGGC TCTTCATCGA CCAGGTCGGC AAATTCGTCA CCGCCCAGGC CGACTACTTC
TACGCACCGG CGGCCGGCAT CATCTACGCG GCGTTCGCCC TACTCCTCAT CATCACCCAG
GCGCTCCGGG AACGGACCCG GTTGTCCTGC ACCGAACGGA CGGCGAACGC CCTGGACACG
GTGATCGGGG GCCTCGACAA GGGGTTGTCC GATCGGCGTA GACGCGCGGT ACTGCGGCTG
GTCCGCGACT GTGGTCCGGA CGTGACGGAG GCGGTGGCCC GGCTGCTGGA GACCGTACCC
CGGAGGGAGC CAGCCCGAGC CCCACTCCGG CGACCGTGGG CACGACGTGC CCGGCAGGCG
ATGGCCTGGG TGGTCAGCCG TCGGTGGGTA GTCGGCTTGG TGGTGGTCTA CCTGCTCGGC
GAGCCGCTCG TCGTCGTGGC GCGGGTCGGG GTGGATACAG TCGTTGGAGA TCTACCGAAC
CATCAGGAAT GGGGTGCGGT GCTAGGGGTC GCGTCCTCCG CGCTGGCCAC TGTGGTGCTC
AGCATCCGCG GGGCGCTGCT GCTGCCCCGC GACGAGGTGG GGGCCTTCCG GCTGTTTAGG
CTCGCGCTTC TGGTGGACCT GTTGTTCGGT CAGGTCTTCA GCTTTACCGT TCACCAGTTC
GGGGCGCTCG TTGGGCTCGC CATCGACCTA TTCCTACTTG CGGTGGTTAC CGTCAAGTAT
CGCGAGCTGC GCCGGAATGC ATCGGCGTGA
|
|---|
| Protein sequence | MPPQAVSAPS DILTFVLSGV VAVLLTRAYL HATGFPRFDA GSLRIAHVLW GGLLLTVGFG
VVLVFLGSRA RFFGAILGGI GFGLFIDQVG KFVTAQADYF YAPAAGIIYA AFALLLIITQ
ALRERTRLSC TERTANALDT VIGGLDKGLS DRRRRAVLRL VRDCGPDVTE AVARLLETVP
RREPARAPLR RPWARRARQA MAWVVSRRWV VGLVVVYLLG EPLVVVARVG VDTVVGDLPN
HQEWGAVLGV ASSALATVVL SIRGALLLPR DEVGAFRLFR LALLVDLLFG QVFSFTVHQF
GALVGLAIDL FLLAVVTVKY RELRRNASA
|
|---|
| |