Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1596 |
Symbol | |
ID | 5058054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1816090 |
End bp | 1817778 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640473869 |
Product | hypothetical protein |
Protein accession | YP_001158440 |
Protein GI | 145594143 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.117286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTTCCG GCTTCGGTGA CCTGACTGAC CACGCGCATC ATCTGGTGGC TACCGGCGAC CTCGCCGGCG CCCAGCGGCT CCTCTCCGAC GCGCTGACCG ACGCCGACCC ACGGCCTACC AAGGCCAGCG CCGAGTTGGC CGAGTTGGCG AGCCTACAGG CGAGGGTGCT GGTGGGGCTC GGCGATCCGC AGGCCGCGCG AGGTTGGGCC GCCTACGCGT ACGCAGCCAG CAACCACCTG CACGGCCGCT CGGACGAACG GACCGTCACG GCAGCCGCCA CCCTGGCCGC GGTGTTGCAC CGGGTCGGTA GTTGGTCCCG GGCAGCCCGG ATCTACCAGG AGGTGATTAT CGAGCTGACC GCCCTGGACG GCCCGGAGGC GCTTCGCGTT CTCGCCGCGC ACGCCGATCT GGCCACGCTG GAGTACGCCC GCGGACAGTG CCGGGTGGCC CGCGACCGGC TCGCCGACGC GTGGGAGCTG CACCGCGAGG TGTACGGCGA CGGGCATCCC AGCGGCATCA AGATGCTCGC CCGACTCGGC GCGATGCAGC GCGACTGCGG GTTGTTCGCT TCGGCGCAGG AGAGCCTGGC GCTGGCCGAG GAGTTGTGCC GCCAGCACCT GGCCGAGGAG GACCCACTGG CGGGGCAGGT GGCCGCGCTG GGCCGGGCGG CGGCTGATCC GGAGCACCGC TGTGGCGGCC GTGCCGCAGA CGGGCGGGAG GCCCCGATCG TGCCGGCCGC TCGGACGCCC CCGCCGGGAG AGGGGCCGCT CCCCGAGGAC CGCCTGCTAC CCGACGACGG GCTGCTACCC CACCACGGAT CGCTTCCCGA CGACGAGCTA CTACCCGACG ACGCGCCACT GGATGAGGCC GGGCCTCAGC ATCCGTCGCA GCCCGGGTAC AAACCCGCCG ACCTGTACCG TCCGCCGGAG CCGGCCCGGC CGGTGGCCGA GGAGCATCCG ACGGCCGGAT ACTCACCGCC GCCGACGGTC CCGACGCCCC GGCTACCGGT GGACGGCGCC GCAGTCCACC GACCACCCGA GCCCTTCACG CCGGATTCAC CGATCAGCGG GGGCGAGCAC GACCCGTGGC AGCCCGAGTC GTCGACCGAA CACTGGGGTG CCGCCGTACC CCCCGCGGTG CTTCCCCTGA CCCGCCTGGA GGAGGCCGAC GGGGTCCGCC GGGTCGAACC CCACGAGTTG CCCGACGCGC CGCCGGATCA GCCGTCGCGG CTGTTGCCGG TGCCGGTGCC GCGCGCCACA CGGCCGCCCC GTCACCGGCT GCCACTCGTG GTGGGTGGGG TGGTGGTGCT GCTGGGGACA GCCGCGGTGA TCGCCGGGGT ATCCCGGTTC GACGGATCGA CACCGCCGCC GGCGGCGGAC CCGGTAACCG GGGCTCCGAC CACACCGGCG ACCACTCCCG GCACTCCGCC CGGTGAGCTG ACCCTGACCG ACAACCGGGA CAACGTCGCC CTGAGCTGGA CCTACCCGGA GGGAGGAGAG GGCCCGGTGG TGGTCTCGGG GGGCCAGCCC GGCGAGTCGC AGGCCGTTTT CGCCAACCTG CCCGCCGGCA GCACCGAATT CGTCGTGCAC GGGCTCAATG GTGGCGTCGA CTACTGCTTC GCCGTGGCGG TGGTGTGGTC GACGGAGACG ATCGCCCGCT CCGGGGATGT CTGCACCGAG CGCGGTTGA
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Protein sequence | MPSGFGDLTD HAHHLVATGD LAGAQRLLSD ALTDADPRPT KASAELAELA SLQARVLVGL GDPQAARGWA AYAYAASNHL HGRSDERTVT AAATLAAVLH RVGSWSRAAR IYQEVIIELT ALDGPEALRV LAAHADLATL EYARGQCRVA RDRLADAWEL HREVYGDGHP SGIKMLARLG AMQRDCGLFA SAQESLALAE ELCRQHLAEE DPLAGQVAAL GRAAADPEHR CGGRAADGRE APIVPAARTP PPGEGPLPED RLLPDDGLLP HHGSLPDDEL LPDDAPLDEA GPQHPSQPGY KPADLYRPPE PARPVAEEHP TAGYSPPPTV PTPRLPVDGA AVHRPPEPFT PDSPISGGEH DPWQPESSTE HWGAAVPPAV LPLTRLEEAD GVRRVEPHEL PDAPPDQPSR LLPVPVPRAT RPPRHRLPLV VGGVVVLLGT AAVIAGVSRF DGSTPPPAAD PVTGAPTTPA TTPGTPPGEL TLTDNRDNVA LSWTYPEGGE GPVVVSGGQP GESQAVFANL PAGSTEFVVH GLNGGVDYCF AVAVVWSTET IARSGDVCTE RG
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