Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1578 |
Symbol | |
ID | 5058036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1792787 |
End bp | 1794508 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640473851 |
Product | ATPase domain-containing protein |
Protein accession | YP_001158422 |
Protein GI | 145594125 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.593562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACCCA GTCCCCAACA CGAGCCGCAC GCCACCCCTT CGCTCGGATT GACCCCTTTG TCCCGGGTTC ACCTGGACGA GCTGCTGCAG GAGATGCTGG ACCGGGTCAG CCAGGTCGTC GCCAGTCGGG AACGACTGCG GGCCCTGCTC GACGCGGTGG TCGGGATCAG CACCGACCTC GACCTGCGCA GCACGCTGCA ACGCATCGTC GAGGCGGCCT CCGAGCTGGC CGGGGCCCGC TACGGCGCGC TCGGCGTCCT CGGCCGGGAC CGGACGCTGC ACGACTTCGT CACCCACGGT ATCGACGACG AGCAGCGCGC CAAGATCGGT GAGCTGCCGC ACGGCCGTGG CGTCCTCGGC CTGTTGATCG ACGATCCACG CCCGGTGCGG ATGCCCGACA TCACCCAGCA CCCCGACTCC TACGGCTTCC CGCCGAACCA CCCGCCGATG CGCAGCTTCC TCGGGGTACC GGTGCGGATC CGGGACCAGG TCTTCGGCAA CCTCTACCTG GCCGAGAAGC GGGACGCGGC CGAGTTCACC GAGGACGACG AGGAGATCGT CGTGGCGCTC GCCGCGGCGG CCGGGGTGGC GATCGAGAAC GCCCGCCTCT ACGAGCTGGC GCACCGGCGG GAGCGGTGGC TGGCCGCCGC CGCCGAGATC ACCACGCTGC TGCTCGGCGA GGTCCACCGG ACCGATGCGC TGTCGCTGGT GGCGCGGCGT GCCCGGGAGG TCGCCGAGGC GGAGCTGGCG CTGGTGCTGC TCTACGACCC CGGCGCGGAC ACCTTCACCG TTGACGTGGT CGACGGCGCG GGTGAGCAGG CCGCTGCCCT GGTCGGCACC GTCCTACCCG CCGCCGACAC CAGTTTCGGC GCCGCCGTCA TCCATGGTCG GCACGACCGG GTGGCGGACC TCGCCTACGC CGCGCCCTGG CCGGCGCTGT TCGACACCGG GCCGGCGGTA CTCTCCCCAC TGGCGACCGC GGACACCCTG CACGGCGTGC TGGTGGTGGC GTACAGCGCT GACCACGATG ACACCAGCGA GGACGACCTG GCGCTGCTGG GCAGCTTCGC CGCACAGGCC GCGCTGGCCA TGGAGCGGGC CCGGGGTCAG GAGGAGCGGG AGCTGCTGGT GGTCCTGGAG GACCGCGAGC GGATCGCCCG GGACCTACAC GACGTGGTGA TTCAGCGATT GTTCGCCACC GGTCTGCAGT TGCAGAGCGC GGTGCCGATG AGCACCCGCC CCGAACTCGC CAACCGGATC AACGCTGCGG TGGACGACCT GGACGCCACG ATCAAGGACA TCCGCCGCAC CATTTTCGAG CTGCGTACGC CGATGACCGC GCAGCTGCGG TCAGAGATCC GGGAGGCGGT CGAGGACGCC GCCGAGTCGC TGGGCTTCCG GCCCGCGCTG GAGTTGGCCG GCCCGATCGA CAGCGCCGTC TCGGACGAGT TGCGTCCCGA TCTCACGGCC GTGCTCCGGG AGGCGCTGTC GAACGCGGTG CGCCACGCCC GGGCCCAGCG CGTCGCGGTC ACTGTCCAGG TGGCGGCCGG CCAGGTTTCG GTGACCGTCA CCGACGACGG GGTCGGCTGC GATCCGGCCG CCGCCCGGGG TGGGCTGGTC AACCTGCGCG AACGCGCCGA GCGCCACGGT GGGGTCTTCG AGGTGCGACC GGAGCACCCG CACGGCACCC GGCTGTACTG GTCCGTGCCG CTGGACAGCT GA
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Protein sequence | MTPSPQHEPH ATPSLGLTPL SRVHLDELLQ EMLDRVSQVV ASRERLRALL DAVVGISTDL DLRSTLQRIV EAASELAGAR YGALGVLGRD RTLHDFVTHG IDDEQRAKIG ELPHGRGVLG LLIDDPRPVR MPDITQHPDS YGFPPNHPPM RSFLGVPVRI RDQVFGNLYL AEKRDAAEFT EDDEEIVVAL AAAAGVAIEN ARLYELAHRR ERWLAAAAEI TTLLLGEVHR TDALSLVARR AREVAEAELA LVLLYDPGAD TFTVDVVDGA GEQAAALVGT VLPAADTSFG AAVIHGRHDR VADLAYAAPW PALFDTGPAV LSPLATADTL HGVLVVAYSA DHDDTSEDDL ALLGSFAAQA ALAMERARGQ EERELLVVLE DRERIARDLH DVVIQRLFAT GLQLQSAVPM STRPELANRI NAAVDDLDAT IKDIRRTIFE LRTPMTAQLR SEIREAVEDA AESLGFRPAL ELAGPIDSAV SDELRPDLTA VLREALSNAV RHARAQRVAV TVQVAAGQVS VTVTDDGVGC DPAAARGGLV NLRERAERHG GVFEVRPEHP HGTRLYWSVP LDS
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