| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1524 |
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| Symbol | |
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| ID | 5057977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1732704 |
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| End bp | 1734332 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473792 |
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| Product | ABC transporter related |
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| Protein accession | YP_001158368 |
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| Protein GI | 145594071 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0146442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0990499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCGCT TCTTCGAGAA CGCCGCGGAC CCCTTCGGTG TCGATGAGCC CGCTGACGCA
CCACAGCGGG TCCTGCCCTA TCTGATCTCC GAGTTCCGGC CGCTGCGGTT CATCCTCGCC
GCCGGCCTGC TCGCCACCGT TGTCAGCGCC GGCGTCGAGC TCTGGCTCAT CGCCTACGCT
GGCCGCCTGG TGGACACGCT CGCCGGGGCC GACTCGGCGG CGCTGTGGCA GACCCACGGC
ATGGAGCTGT TCGTGGTCGG GGCGCTGATT CTCTTCGTCC GGCCCCTCCT CGCTCTGTTC
AACGAGGGCC TGGATGACAT CGCGTTTCGG CCCAACGCAC GCACCCGCGC GCTCTGGCGA
GCGCATCGGC GGGTGTCCCG GCAGCCGGTC GGCTGGTTCC GCGAAGACCT CTCCGGTCGC
ATCGCCACCC GGGTGCGGGA GGGTTCGGCC GCGGCGGCCA TGGCGACGTA CACCGTCGTG
CACACGCTCG CCTTCGTCTT CACCTATATC GTTGGGTCGG TCTGGTTGCT GGGCTCCGTC
GACCCACGCC TGGTGCTGCC GCTGGCGGTG TGGATTCTGC TCTACGCCGG GCTGATGACT
TACGTCGTGC CGCGTTACCG TGCCGCGTCA GAACACCATC AGGACGCCGA CTCGGCGGTC
ACCGGCCTGC TGGTCGACTC ATACGCCAAC GTCGACACGC TCGCGTTGCT CGACGTACCA
GCCGCAGCGG ACCGGGCCGT CTTCGCCGCC GAGCGCCGCG CCCGGCTGCG GATCGAGCGG
CTCGAAGTCA CCATGAACGT CGGGATGGTG TGCCTCAGTG GGATCCTGAT GGTGGGGCTG
ATCGGTTACG GCATTCTGCT GTGGCAGGCC GGTGCCGCCC CCATCGGTAT GGTCGCCGCC
ACGCTGGCAC TGACCTTTCG GATCACCGCG ATGGCAGAGT GGCTGCTCGA CGGTGTCTCG
GCGCTTTTCG GGTGTCTCGG TACCCTGCGA CGCGCGCTGC GCACGATCGC CCAGCCACCA
GTGGTCACCG ACCGGCCGAA CGCGGGAGCG CTGGCGGTGC GGGGCGGGGC CATCAGGATC
ACCAACGTCA GTCACCACTA CGGCACGGGC AGCGGTGGGC TGGATGGGCT CAGCCTCGAG
ATCGCCGCGG GCGAGAAGGT CCGGGACAAC ATCGGTCTGG CCGCAGCCGG GGAGGAGAGC
ATCGTCGCGG CGGCGCGACA GGCGGTCGCA CACGACTTCA TCACCGTCCT GTCCGACCAG
GGTGGTCGTA CCGGCTACCA CGCTCATGTC GGGGAGCGGG GCGTCAAGCT CTCCGGTGGC
CAGCGTCAGC GCATCGCCCT CGCTCGTGCC ATCCACAAGG ACGCGCCGAT CCTCATCCTG
GACGAGGCGA CCAGCGCCCT CGACTCCGAG GTCGAGGCGG CGATCCAGGA CACCATGGAC
AAGGTCATGG CCGGTTGTAC GGTGATCGCC GTCGCGCACC GACTGTCCAC GATCGCCCGC
ATGGACCGGA TCGTCGTACT CGACCAGGGG CGGATCGTCG AGGACGGTAC CCACGCCGAA
CTGCTGCGCC ACAACGGCCG CTACGCCGCC CTCTGGGCGA GACAGGCTGG TGGGTTTCTC
GGCCGGTGA
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| Protein sequence | MFRFFENAAD PFGVDEPADA PQRVLPYLIS EFRPLRFILA AGLLATVVSA GVELWLIAYA
GRLVDTLAGA DSAALWQTHG MELFVVGALI LFVRPLLALF NEGLDDIAFR PNARTRALWR
AHRRVSRQPV GWFREDLSGR IATRVREGSA AAAMATYTVV HTLAFVFTYI VGSVWLLGSV
DPRLVLPLAV WILLYAGLMT YVVPRYRAAS EHHQDADSAV TGLLVDSYAN VDTLALLDVP
AAADRAVFAA ERRARLRIER LEVTMNVGMV CLSGILMVGL IGYGILLWQA GAAPIGMVAA
TLALTFRITA MAEWLLDGVS ALFGCLGTLR RALRTIAQPP VVTDRPNAGA LAVRGGAIRI
TNVSHHYGTG SGGLDGLSLE IAAGEKVRDN IGLAAAGEES IVAAARQAVA HDFITVLSDQ
GGRTGYHAHV GERGVKLSGG QRQRIALARA IHKDAPILIL DEATSALDSE VEAAIQDTMD
KVMAGCTVIA VAHRLSTIAR MDRIVVLDQG RIVEDGTHAE LLRHNGRYAA LWARQAGGFL
GR
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