Gene Strop_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1501 
Symbol 
ID5057954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1713371 
End bp1714042 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID640473769 
Producthydrolase 
Protein accessionYP_001158345 
Protein GI145594048 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.284221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.401129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCAGG CGATCTTGCT GGACGTGTAC GGCACGCTCG TACACGATGA TGAGAGCTCG 
GTCAATGACG TCTGCGTGCA GGTAGCAGAC TTGATCGCAG TCGATCCGTC TGCTATCGCG
GCGGAGTGGT CCCGACGGCT GGAGGCCAGC GCCGAGATGG CGTATGGGGC CGGTTTTCGT
ACGCTCGCAG ACCTGACGCT CGGCAGCCTC ACCGAGGCTG TGGCGAACTT CGGGGCGTCC
GTGGAGCTTG AGCCGATCTG CCGGAAGCAG CTGCACTCCT GGCGTCATCC ACCGTTGTAC
GACGACAGCC GGCCGTTCCT CGATGCTGTG ACGGTGCCGG TGTGCCTGGT CTCCGACGTC
GACCAGGACG ACCTGACGGC GGTGCTGCGG TGGCACGACA TCGCCGTCGC CGCCGCGGTG
ACCAGCGAAG AAGCCCGCGC ATACAAGCCC CGCCCCGAAC CGTTCCAGCT CGCGCTGGCC
CGCCTCGGCC TGGGCCCCGG CGACGTGATC CACATCGGCA ACTCCGCATC GTCCGATGTC
GCCGGAGCCG CCGCTCTGGG TATCGACACG GCGTTCCTCG ACCGTGCTGG AGACGGCCTG
CCGCCGGGGG CCACGGCAAC CTACACCGCG GCTACGCTGA CGGCGCTGCT GCCCCAGGTG
TTGCCATGTT GA
 
Protein sequence
MYQAILLDVY GTLVHDDESS VNDVCVQVAD LIAVDPSAIA AEWSRRLEAS AEMAYGAGFR 
TLADLTLGSL TEAVANFGAS VELEPICRKQ LHSWRHPPLY DDSRPFLDAV TVPVCLVSDV
DQDDLTAVLR WHDIAVAAAV TSEEARAYKP RPEPFQLALA RLGLGPGDVI HIGNSASSDV
AGAAALGIDT AFLDRAGDGL PPGATATYTA ATLTALLPQV LPC