| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1493 |
|---|
| Symbol | |
|---|
| ID | 5057946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1704900 |
|---|
| End bp | 1705484 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640473761 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_001158337 |
|---|
| Protein GI | 145594040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.247628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGG AACCACTGAA GATCGTCATC CTTGTTGGTA GCACCCGTAA AGGCCGCTTC
GGGCCCGTGG TGGCCAACTG GTTCGCCGCG CAGGTGCGGC AGCGTGACGA CATGGAACTC
GACCTCATCG ACCTCGTGGA GGCGAACCTG CCGTACGAGT TGCCGGACTT CAACGCGAAT
GAGGAGCCTG TGGCGGTTCG TGCGCTCACC CCCCGGCTCG CGGCGGCGGA CGGGTTCGTC
TTCGTGACGC CGGAGTACAA CCACAGCTAC CCCGCCTCGC TCAAGAACGT GGTCGACTGG
TACCGGAAGG AGTGGCAGGC CAAGCCGGTC GGCTTCGTGT CGTACGGCGG GCTCGCCGGC
GGTCTGCGCT CGGTCGAGCA CCTGCGGCCG GTCCTAAGTG AGGTGCATGC GGTCCCGATC
CGAGACACCG TCAGCTTCCA CGGTGCGGGG GAGCGGTTTG ACGGATCCGG CGCGCCGACC
GACCCGCGGG GCTGCAATGC CGCGGCGAAG ACGTTGCTCG ACCAGCTGGC ATGGTGGTCC
GGTGTTCTGC GGACCGCGAG AGCCGACCAT CCCTACGGCA CCTGA
|
|---|
| Protein sequence | MSVEPLKIVI LVGSTRKGRF GPVVANWFAA QVRQRDDMEL DLIDLVEANL PYELPDFNAN
EEPVAVRALT PRLAAADGFV FVTPEYNHSY PASLKNVVDW YRKEWQAKPV GFVSYGGLAG
GLRSVEHLRP VLSEVHAVPI RDTVSFHGAG ERFDGSGAPT DPRGCNAAAK TLLDQLAWWS
GVLRTARADH PYGT
|
|---|
| |