| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1488 |
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| Symbol | |
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| ID | 5057941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1696471 |
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| End bp | 1697709 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640473756 |
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| Product | deoxyribonuclease |
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| Protein accession | YP_001158332 |
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| Protein GI | 145594035 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.290236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.555959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCG ACGAGGGGCT GGCGGAGGCC GAGCGGGTCG AGTTGACCGT CGGGGCGGTG
GCCCCGGGTG GCCACTGCGT CGCCCGGGTT GCCGGCCAGG TGGTCTTCGT CCGGCATGCG
CTGCCCGGTG AGCGGGTGGT GGCCGAGGTC ACCGAGGTGC ACCGCGGTTT CGTCCGGGCC
GACGCGGTGA CGGTGCTCCA GGCCGCGCCG GAGCGGGTCG AGCCCCCCTG CCCGTACGCG
AAGCCAGGCC GCTGCGGCGG CTGTGACCTA CAGCACGTGT CCCCCGAGGC GCAGCTGACC
TGGAAGGCGG GGGTGATCCG CGAGCAACTC ACCCGACTGG GTGGACTGAC CGGCGCGGAG
CTGGACGCGC TGGGCATCCA GGTCGAGGCG CTGCCCGGCG GGTCGTTGGG CTGGCGCTCC
CGGGTGCGGT ACACCGTCGA CGGCGCCGGT CGGGCCGGTC TGCTCAAGCA CCGCTCGTAC
GAGGTGGTGC CGATCGACCG GTGCCGGATA GCCCACCCGG CGATTCAACA ACTGCCGGTG
CTCGGCGTGC GGTGGCCGGA CGCGGACGCC GTCGAGTCGG TCGCCACCAC CGGCGGCGAC
GTGACCGTGA CCGCTGTCGC CGACGGGGCG GCGCGGCCGG TGAGCGGGCC GGAACGGGTT
CACGAACAGG CTGCCGGACG TCGGTGGACG CTGTCCCCAT CGGCGTTCTG GCAGGTCCAC
CCGGCGGCGG CGGACACCCT GGTCAACGCC GTGCTGGCGC AGCTCGATCC GCGGCCGGGG
GAGACCGCCT GGGACCTGTA CGGCGGGGCG GGCCTCTTCG CCGCCGCGCT GGCGGAGCGG
GTCGGCACCA CCGGTCGGGT CACCCTCGTC GAGGCGGCCG GAGCCGGCGT CGCCGCGGCT
CGGCAGAACC TGCGGGACCT GCCGCAGGCC GGCATCGTCT CGGGCCGGGT CGCCCCGGTG
TTGGCCCGCG GGCAGGTCGC CGGCCCGGTG GACGTGGTGG TGCTCGATCC GCCCCGGTCC
GGGGCCGGGG CCGGGGTGGT ACGGGCGGTG GCCGGCACCG GAGCGCGCGC GGTGGCGTAC
GTGGCCTGCG ACCCGGCGGC CTTCGCCCGA GACGTACGTG GCTTCGCCGA GCTGGGCTGG
CGGCTCACCG CGCTGCGTGG CTTCGACCTG TTTCCCATGA CCCAGCACGT GGAGTTGGTG
GGGTTGCTGC TGCCGCACCG GCGGCGGACC AAGGCCTGA
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| Protein sequence | MTGDEGLAEA ERVELTVGAV APGGHCVARV AGQVVFVRHA LPGERVVAEV TEVHRGFVRA
DAVTVLQAAP ERVEPPCPYA KPGRCGGCDL QHVSPEAQLT WKAGVIREQL TRLGGLTGAE
LDALGIQVEA LPGGSLGWRS RVRYTVDGAG RAGLLKHRSY EVVPIDRCRI AHPAIQQLPV
LGVRWPDADA VESVATTGGD VTVTAVADGA ARPVSGPERV HEQAAGRRWT LSPSAFWQVH
PAAADTLVNA VLAQLDPRPG ETAWDLYGGA GLFAAALAER VGTTGRVTLV EAAGAGVAAA
RQNLRDLPQA GIVSGRVAPV LARGQVAGPV DVVVLDPPRS GAGAGVVRAV AGTGARAVAY
VACDPAAFAR DVRGFAELGW RLTALRGFDL FPMTQHVELV GLLLPHRRRT KA
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