| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1464 |
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| Symbol | |
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| ID | 5057917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1668605 |
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| End bp | 1669585 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473732 |
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| Product | transcriptional regulator TrmB |
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| Protein accession | YP_001158308 |
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| Protein GI | 145594011 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.862849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.230975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGCG TGTTGGGATT CAGCCCCGAC GACGAGGCGG TCTACCACCT ACTCGTCCGG
AGAGGTCAGG CCGACCCCGT CGAACTTGCC GACGCGCTGC GGATGCCCCT CTCGACCGTG
GCGGCGGCGC TGTCCCGCCT CACCGACCGC GGCCTGACGA AGCAGGGCTC CGACGAAGCG
TTCTTGGTGG CACCGCCCGC GGTCGCGCTC GGGGCGCTGA TCGGCGAGCA GCAGTCCGCA
CTGCGCGCCG CGGAGTTGGC CCTCGTCACA CTCGCGGAGG AGTATCGCGG GGCGACCGCG
GGGCGCACCA TCGGAGAACT GATTGAGCTG GTCACCGGGG TCGACGCCGT CCGCCACCGC
TTCGCCCAGG TGCAGCACGC CGCCCAGCGG GAGGTTCGCA GCTTCGTCAC CGCCCCCTTC
GTCGCCGTAC CGCCGGGCAG CAACACGGTG GAGTCGGTCG CGGTGCGACA GGGCGTACGG
TTCCGGGTGG TGATTGACCG GCCGGCGCTG GCCGAGCCAG GCGTGGTCGC GGAGACCCTG
GAGTCCCTCC GCGACGGTGT GCAGATACGG GTGACAGAGT CCCTACCGAT CAAGCTGATC
CTCGCTGATG CCGCGCTGGC GCTGGTCCCG TTAGCGGCCA TAGCCGAGGG TGAGCCCGGT
GCGGTACTAC TGCATCGCAC CGGCCTGCTG ACCGCGATGG ACGCGCTGTT CGAAGCCGTG
TGGCGGGACG CCCACCCGCT GACCCTGTCG GCGGCGAGCA CGCTGAGCGA GGACTCCGAC
GGCGACGTCG ACACCCCGAC GGAACTGGAC CGCCAGATCC TGACCCTGCT CTTGGCCGGG
CTCACCGACC CGGTCGTGGC CAGCCAGCTC GGCCTGTCGC TGCGTACCCT GCAACGGCGT
CTGCGCCACC TGATGGACCT CGCCGGGGCA GCGTCCCGAA TGCAGCTTGG TTGGTACGCC
GCACGAGAAG GCTGGGTGTG A
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| Protein sequence | MLGVLGFSPD DEAVYHLLVR RGQADPVELA DALRMPLSTV AAALSRLTDR GLTKQGSDEA
FLVAPPAVAL GALIGEQQSA LRAAELALVT LAEEYRGATA GRTIGELIEL VTGVDAVRHR
FAQVQHAAQR EVRSFVTAPF VAVPPGSNTV ESVAVRQGVR FRVVIDRPAL AEPGVVAETL
ESLRDGVQIR VTESLPIKLI LADAALALVP LAAIAEGEPG AVLLHRTGLL TAMDALFEAV
WRDAHPLTLS AASTLSEDSD GDVDTPTELD RQILTLLLAG LTDPVVASQL GLSLRTLQRR
LRHLMDLAGA ASRMQLGWYA AREGWV
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