| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1461 |
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| Symbol | |
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| ID | 5057914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1663545 |
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| End bp | 1664726 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640473729 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001158305 |
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| Protein GI | 145594008 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.111852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.224977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG ACACAGTGGT GGTGTGGGAC GAGAACCTGC TCTCCTACAA CCTCGGCGAC
CACCCCCTCG ACCCGGTGCG GGTCGAGCTG ACCGTCGCGC TCGCCCGAGA GCTGGGTGTG
CTCGGGCGTT CCGGGGTGCG GCTGGTCGAG CCGAAGCCCG TCGACGACGA ACTGCTCACC
CGGGTGCACG ACCCGGCTTA CCTGGAAGCC GTGCGAAACG CCCCGCAGGA TCCGTTCTTC
ACCGGGTTCG GGCTGGGTAC CCCGGACAAT CCGGTCTTTC CGCGGATGCA CGAGGCCAGC
GCGTTGGTCA CCGGGGCCAC CGTCGCGGCC GCCGAGGCCG TCTGGCGGGG CACGGCACGT
CGGGCGGTCA ACGTGGCGGG TGGGCTGCAC CACGCGATGC CCGCGCGGGC CGCCGGCTTC
TGCGTCTACA ACGATCCGGC CGTGGGCATC GCCCGCCTGC TCGACCTGGG CGCGCGTCGG
GTCGCCTACG TCGATGTGGA CGTTCACCAC GGCGACGGGG TGCAACAGGT CTTCTGGGAT
GATCCGCGGG TGCTCACGGT GAGCCTGCAC GAGACTCCAC TCGCGCTCTT TCCGGGCACC
GGGTTCCCCG ACGAGACCGG CGGTGCGCAG GCCCAGGGAA CCGCGGTCAA CGTGCCGCTG
CCACCCGGGA TCGAGGACGT TGGCTGGCAG CGGGCGTTCC ACGCGATCGT GCCGTCGGTG
CTGCGCGCGT TCCAGCCGGA GATCCTGGTG ACCCAGTGTG GCGCGGACGC GCATCGGCTC
GACCCTCTCG CTGACCTGCG CCTGTCGGTT GACGGGCAGC GTGCCACCTA CATCGCTTTG
CGGGCGCTCG CCGATGAGCT CTGTGCAGGT CGCTGGGTCG CCACCGGCGG CGGGGGATAC
GCGCTGGTCG AGGTCGTGCC CCGGGCCTGG ACCCACCTAC TCGCGGTGGC CACCGGTGAA
CCGCTCGCGC CGGCCACGCT CTGTCCGCCC GCCTGGCGCG AGCTCGCCCA GGCCCGCCGT
CCGGGGCAGG AGGTGCCGTT GCGAATGACC GACGAGGTCA ACCCGTCGTA CGAGCCGTGG
CAGCCTTCCG GGGAGCCGAA CTCGGTGGAC CGGGCCATCG TGGCCGCGCG CAAGGCGGTG
TTCCCGCTGC TCGGGCTCGA CCCGTACGAC CCGCGCGACT AG
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| Protein sequence | MPDDTVVVWD ENLLSYNLGD HPLDPVRVEL TVALARELGV LGRSGVRLVE PKPVDDELLT
RVHDPAYLEA VRNAPQDPFF TGFGLGTPDN PVFPRMHEAS ALVTGATVAA AEAVWRGTAR
RAVNVAGGLH HAMPARAAGF CVYNDPAVGI ARLLDLGARR VAYVDVDVHH GDGVQQVFWD
DPRVLTVSLH ETPLALFPGT GFPDETGGAQ AQGTAVNVPL PPGIEDVGWQ RAFHAIVPSV
LRAFQPEILV TQCGADAHRL DPLADLRLSV DGQRATYIAL RALADELCAG RWVATGGGGY
ALVEVVPRAW THLLAVATGE PLAPATLCPP AWRELAQARR PGQEVPLRMT DEVNPSYEPW
QPSGEPNSVD RAIVAARKAV FPLLGLDPYD PRD
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