| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1406 |
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| Symbol | |
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| ID | 5057859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1578815 |
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| End bp | 1583434 |
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| Gene Length | 4620 bp |
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| Protein Length | 1539 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640473675 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001158251 |
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| Protein GI | 145593954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.35203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAACC AGGCGGGTGG CAGGTCGACG AGCGGCGAGG CCAGCGACAC GACCGCAGTG
CCCCACACGA CCGACAACAC AGCGCTCGAG GCGTTCGGCC CGGCCACTCG GGAATGGTTC
GCCGCGGCGT TCGCCGCACC GACCACAGCC CAGGCGGGGG CCTGGCGCTC CATCGGCGCC
GGCCGTAACG CACTGGTCGT GGCCCCCACC GGCTCCGGCA AGACCCTGGC CGCGTTCCTC
TGGTCGCTGG ACCGGCTGGC CCGCGAGCCC GCCCCGCCCG AGCCCCGGCA GCGTTGCCGG
GTGCTCTACG TCAGCCCCCT CAAGGCGCTC GCGGTCGATG TCGAACGCAA CCTACGTACC
CCGCTCGCCG GCATCCGACA GGCCGCCGCC CGGCTGGGTC TGACCCCGCC CGCGATCACC
GTCGGCATGC GTACCGGCGA CACCCCCGCC GACGAGCGCC GCGCCTTCGC CCGTACCCCG
CCGGATGTCC TCATCACCAC CCCGGAGTCG CTGTTCCTCC TCCTTACCTC CGCCGCCCGC
GACTCGCTCC GAGGCGTACA GACGGTCATC GTCGACGAGG TCCACGCGGT GGCCGGCACC
AAGCGTGGAG CCCACCTCGC GCTGTCGCTG GAACGGCTCG ACCAGCTACT GCCCACCGCG
GCCCAGCGCA TCGGCCTCTC CGCCACCGTC CGGCCGGTTG ACGCCTGCGC CCGTTTCCTC
GGCGGAGCCC GACCAGTCGA CGTGGTCGCC CCGCCCACCG TCAAGACCAT CGACGTCGGC
GTCCAGGTCC CGGTAGCCGA CATGACCCTC CTCGACGAGC CGGAGCAGCC CGGGCCCGAC
CTCGATCGCC CCCGCCGCGC GTCGATCTGG CCGGCGGTGG AGGAGCGGGT CTACGCCCTC
GTCCGGGCAC ACCGTTCGAC CATCGTCTTC ACCAACTCCC GCCGCTCCGC CGAACGACTC
TGCGCCCGGC TCAACGAGTT GGCCGCCGAG GAATCGGCCG GCGACGCGCC GGGGGCCGCC
ACCCAACCGC CGGCCCAACC GCCGGCCCAG CTGATGGCGC AGGCCGGGGC GGGGACCGGA
GCACCGCCGG TGATCGCCCG CGCCCACCAT GGCAGTGTTT CCCGAACCGA ACGCGAACAC
ATCGAGGAGT CACTCAAGTC CGGGCAGCTC CCGGCGGTGG TCGCCACCTC CAGCCTGGAG
CTGGGCATCG ACATGGGCGC CGTCGATCTG GTCGTGCAGA TCGAGGCCCC GCCGAGCGTG
GCCGCCGGGC TCCAGCGGGT CGGCCGCGCC GGGCACCAGG TCGGCGCCGT CTCCCGGGGC
GTGGTGTTCC CCAAGCACCG AGGAGACCTG CTCGCCTGCG CAGTGGTAGC CGAACGGATG
ACCGAGGGCG CGATCGAGGA GCTGCACCAC CCACGCAACC CCCTCGACGT GCTGGCCCAG
CACATCGTGG CGATGGTGTC ACTCGAGCCG TGGCAGGTCA GCGACCTGGC CGACCTGGTC
CGCCGTTCCG CGCCCTTCGC GGAGCTCCCC GACTCGGCGC TGCACGCGGT ACTCGACATG
CTCTCCGGCC GCTACCCGTC GACCGCCTTC GCCGAGCTGC GGCCCCGCCT GGTCTGGGAC
CGCGCCACCG ACCTGCTGAC CGGCCGTCCC GGCGCCCAGC GGCTCGCGGT GACCAGCGGC
GGCACCATCC CCGACCGGGG CCTGTTCGGC GTCTTCCTGG CCGGGGCGGA GCGGGCCGCA
AGAGTCGGCG AGCTGGACGA GGAGATGGTC TACGAGTCGC GGGTTGGCGA TGTCTTCCTC
CTCGGCTCAT CGTCCTGGCG CATCGAGGAC ATCACCCCGG ACCGGGTGCT GGTAACCCCC
GCCCCCGGCC AGGCGGCCAA AATGCCCTTC TGGAAGGGCG ACCAGCCGGG CCGCCCGGTG
GAGCTGGGCC GGGCCATCGG TGCCCGCCTC CGCACCCTGG TGCAGTCCGA CGACGCCGCC
GCCACAGCCG CGTTGCGCAC CGGGGGGCTC GACGAATGGG CAGCCGGAAA CCTGCTGGCG
TACCTGCGGG AGCAGCAGGC GGCCACCCGT ACCCTGCCGG ACGACCGGAC CGTGGTGGTC
GAGCGTTTCC GCGACGAGCT GGGTGACTGG CGGCTCGCCG TACACAGTGT CCTCGGCGCC
CAGGTCAACG CCGCGTGGGC GCTGGCCATC GGCCGCCGGC TCACCGAGCG GTACGGGGTG
GACGCCCAGG TGCTGCCCGC CGATGACGGG ATTGTCGTCC GCCTGCCCGA CACCGCGGCG
GAGCCGCCCG GGGCAGAAGC GGTCGTCTTC GAGCCCGACG AGATCACCCA GCTGGTCGAG
GAGTCGGTGG GTACGTCAGC GCTGTTCGCC GCCCGGTTCC GCGAGTGCGC CGCCCGGTCG
CTGCTCCTGC CCCGCCGCGA TCCGCGCCGC CGCCAGCCGC TCTGGCAGCA ACGGCAGCGC
GCCGCCCAGC TCCTCGACGT CGCCCGGGAG TACGCGGACT TTCCGGTCAC CCTGGAAGCG
GCTCGGGAAT GCCTCCAGGA CGTCTTCGAC CAGCCGGCAC TCGCCGCGCT GATGCGCGAC
CTGGCCGCCC GCACCGTACG CCTGGTCGAG GTGGAGACGG CGCAGCCGTC GCCGTTCGCG
CGGTCGCTGC TCTTCGGCTA CGTCGGGACG TTCCTCTACG AGGGTGACGC TCCCCTCGCC
GAGCGGCGTG CCGCCGCGCT CACCCTGGAT TCGGCCCTGC TCGGCGAGCT ACTCGGCCGG
GTCGACCTGC GGGAGCTACT CGACCCGACG GTGCTCGCCG AAACCGAACG CCACCTGCGC
TGGCGCACCG AACAGCGCCG CCCCCGCGAC GCCGAGGACG TGGTCGAGCT GCTGCGGGTG
GTCGGCGACC TCAGCACCGC TGAGCTGGCC GAGCGCGGCG CTCCGGCGCA GTGGCTGACC
GAGCTGGTGA CCGCCCGCCG GGTGCTGCGG GTCCGCATCG CCGGCGAGGA GCGCTGGGTG
GGAATCGAGG ACGCCGCCCG GCTGCGGGAC GCGCTGGGGG TGGCGCTGCC CGGCGGCGTG
GCCGAGGCGT ACCTGGCCCC GGTGGCCGAC CCGCTCGGTG ACCTCATCGC CCGCTATGCC
CGCACGCACG GGCCGTTCGC CGCCGCCACC TGCGCCGCCC GGTTCGGGCT CGGGGTGGCG
GTGGTCGAGG GGACGCTGCG CCGGCTCGCC ACCGCCGGTC GGGTGCTCGC CGGTGAGTTC
GCCCCCGACA CGGTCGGCAT CCAGTGGTGT GACGCCGAGG TGCTACGAAT GCTGCGCCGG
CGCAGTCTCG CGGCGCTACG CCGGGAGATC GAGCCGGTAC CACCCCGGGC ACTGGCCACC
TTCCTTCCCC GCTGGCAGCA GGTCGGTGCG GCGGCGCGGG GGCTCCCGGC GGTGGCCGCG
GCCCTGGAGC AGGTGCAGGG TCTGGCCCTG CCCGGATCCG CCCTGGAACG GCTGGTGTTG
CCGGCCCGGG TCGGCGACTA CTCCCCCGCC CAGCTCGATG AGCTGTGCAC CAGCGGCGAG
GTGGTGTGGG CCGGCTCCGG GGCGATATCC GGCGGGGATG GCTGGGTCGT CCTCGCGTAC
GCGGACACCG CCCCGTTGCT GCTTCCCCCG CCGGATGCGG CGCTGGCCCG CACTCCGCTG
CACGATGCGG TGCTCGACGC CCTCGAGGGT GGACAGGCGC TGTTCTTTCG TGCCCTGTCC
GACCGGTTGG GCTCCACCGA CGACGCCGCA CTCGCCGCTG TCATCTGGGA TCTGGTGTGG
GCCGGTCACC TCACCAACGA CACCCTCGCC CCGCTGCGGG CCCTGCTGGC CGGCCGTGGG
GCGCACCGGT CCCGTCCGGC CGCGCCCCGT ACCCGCTACC GGCGACCCGG CCGCGTCGCC
CTGCCATCGC GCAGCGGCCC GCCCACGGTC GCCGGCCGCT GGTCGCGCCT GCCCGAACGG
GACGCCGACC CGACCCGCCG CGCCGCGGCC CTCGCCGACG TACTGCTGGA ACGGCACGGC
GTGGTGACTC GGGGTGCGGT CGCGGCGGAG CAGGTGCCCG GCGGGTACGC CGCCGTCTAT
CCGGTGCTGT CCGCACTGGA GGAGCGGGGG GCCACCCGTC GCGGCTACTT CGTGGAGGGG
CTGGGGGCCG CACAGTTCGC CGTACCCGGG GCGGTCGACC GACTGCGTGC GCTGGCCGAC
CCGGCCGACG GCGGGCGGGT CCGAGCGGGC CTGGCCCTGG TCCTCGCCGC GACCGACCCC
GCCAACCCGT ACGGGGCGGC ACTGCCCTGG CCGGAACGGG TGGTCGACTC TGGGGACGGC
GGTGCCAACC CGACCGGGCA CCGGGCGGGC CGCAAGGCCG GTGCCCTGGT GGTGCTGGTC
TCCGGCGATC TGGTCCTCTA CGTCGAGCGG GGCGGTCGGA CGCTGCTCTC CTTCACTGAC
GACAGGGACC TGCTGGCGAC CGCCGGTAAG GCGCTTGCCG ACGCCGTACA GGGTGGAGCC
CTTGGGACGA TCTCGGTGGA ACGGGCCGAC GGCGAGGCGG TGCGCTCGTC ACCGCTGCGC
GACGCGTTGA CCGCCGCCGG GTTCCGGGCC ACCCCCCGCG GGCTCCGCCT GCGGGGCTGA
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| Protein sequence | MANQAGGRST SGEASDTTAV PHTTDNTALE AFGPATREWF AAAFAAPTTA QAGAWRSIGA
GRNALVVAPT GSGKTLAAFL WSLDRLAREP APPEPRQRCR VLYVSPLKAL AVDVERNLRT
PLAGIRQAAA RLGLTPPAIT VGMRTGDTPA DERRAFARTP PDVLITTPES LFLLLTSAAR
DSLRGVQTVI VDEVHAVAGT KRGAHLALSL ERLDQLLPTA AQRIGLSATV RPVDACARFL
GGARPVDVVA PPTVKTIDVG VQVPVADMTL LDEPEQPGPD LDRPRRASIW PAVEERVYAL
VRAHRSTIVF TNSRRSAERL CARLNELAAE ESAGDAPGAA TQPPAQPPAQ LMAQAGAGTG
APPVIARAHH GSVSRTEREH IEESLKSGQL PAVVATSSLE LGIDMGAVDL VVQIEAPPSV
AAGLQRVGRA GHQVGAVSRG VVFPKHRGDL LACAVVAERM TEGAIEELHH PRNPLDVLAQ
HIVAMVSLEP WQVSDLADLV RRSAPFAELP DSALHAVLDM LSGRYPSTAF AELRPRLVWD
RATDLLTGRP GAQRLAVTSG GTIPDRGLFG VFLAGAERAA RVGELDEEMV YESRVGDVFL
LGSSSWRIED ITPDRVLVTP APGQAAKMPF WKGDQPGRPV ELGRAIGARL RTLVQSDDAA
ATAALRTGGL DEWAAGNLLA YLREQQAATR TLPDDRTVVV ERFRDELGDW RLAVHSVLGA
QVNAAWALAI GRRLTERYGV DAQVLPADDG IVVRLPDTAA EPPGAEAVVF EPDEITQLVE
ESVGTSALFA ARFRECAARS LLLPRRDPRR RQPLWQQRQR AAQLLDVARE YADFPVTLEA
ARECLQDVFD QPALAALMRD LAARTVRLVE VETAQPSPFA RSLLFGYVGT FLYEGDAPLA
ERRAAALTLD SALLGELLGR VDLRELLDPT VLAETERHLR WRTEQRRPRD AEDVVELLRV
VGDLSTAELA ERGAPAQWLT ELVTARRVLR VRIAGEERWV GIEDAARLRD ALGVALPGGV
AEAYLAPVAD PLGDLIARYA RTHGPFAAAT CAARFGLGVA VVEGTLRRLA TAGRVLAGEF
APDTVGIQWC DAEVLRMLRR RSLAALRREI EPVPPRALAT FLPRWQQVGA AARGLPAVAA
ALEQVQGLAL PGSALERLVL PARVGDYSPA QLDELCTSGE VVWAGSGAIS GGDGWVVLAY
ADTAPLLLPP PDAALARTPL HDAVLDALEG GQALFFRALS DRLGSTDDAA LAAVIWDLVW
AGHLTNDTLA PLRALLAGRG AHRSRPAAPR TRYRRPGRVA LPSRSGPPTV AGRWSRLPER
DADPTRRAAA LADVLLERHG VVTRGAVAAE QVPGGYAAVY PVLSALEERG ATRRGYFVEG
LGAAQFAVPG AVDRLRALAD PADGGRVRAG LALVLAATDP ANPYGAALPW PERVVDSGDG
GANPTGHRAG RKAGALVVLV SGDLVLYVER GGRTLLSFTD DRDLLATAGK ALADAVQGGA
LGTISVERAD GEAVRSSPLR DALTAAGFRA TPRGLRLRG
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