| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1400 |
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| Symbol | |
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| ID | 5057853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1570585 |
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| End bp | 1571457 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473669 |
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| Product | PspA/IM30 family protein |
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| Protein accession | YP_001158245 |
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| Protein GI | 145593948 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.29509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACC CGTTCGTCAA GGGTTGGAAA TATCTGATGA CGCTCTTCGG CACCAGGCTC
GACGAGCGTG CCGACCCGAA GGTGCAGGTC CAGCAGGCGA TCGAGGAGTC CCAGCGGCAG
CACCAGCTGC TCGTCCAGCA GGCTGCCGCG GTGATCGGCA ACCAGCGGCA GCTGGAGATG
AAGCTGTCCC GGCAGATGTC CGAGGTCGAG CGGTTGCAGG GCAACGCCCG CCAGGCCCTG
GTGCTGGCCG ACCAGGCCCG CGCCCGGGGC AGCGCCGCCG AAGCCACCCG CTACGAGCAG
TCCGCTCAGG CCCTCGCCAC CCAGCTGGTC GCTGCCGAAC AGGCCACCGA AGACCTCAAG
ACCCTGCACG ACCAGGCGCT TGGCGCGGCT GCGCAGGCGC GTAAGGCGGT CGAGAACAAC
TCGATGATTC TTCAGCAGAA GCTCGCCGAG CGGGCGAAGC TGCTCAGCCA GCTTGAGCAG
GCCAAGATGC AGGAGAACGT CGCCGCGTCG TTGGAGTCGA TGTCCGCGAT CACCGCCCCG
GGTACCACCC CGACCCTGGA CGAGGTACGC GAGCGCATCG AGCGGCGCTA CGCCAATGCG
ATGGGCCGAG CCGAGCTCGC CGGCAACTCC GTCGAGGGGC AGATGCTCGA CATCCAGCAG
GCAGCCCTCG ACGCGGCCGG CTCCGCCCGA CTCGATCAGA TCCGTGCCGG CATGGCCGGG
GAGCAGCTGC GCGGCGCGGC CGAGCGGCCC GCGGTCACCC CCGAGCAGCA GGGCGCCCCG
GTTGTCGATC CGGCCGCCGC GGCCCGGCTC GACGAGATCC GCACCACTCT GGGCCGCGAA
CGCGGCACCG GGGACAGCAC CGCCGCCGGC TGA
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| Protein sequence | MANPFVKGWK YLMTLFGTRL DERADPKVQV QQAIEESQRQ HQLLVQQAAA VIGNQRQLEM
KLSRQMSEVE RLQGNARQAL VLADQARARG SAAEATRYEQ SAQALATQLV AAEQATEDLK
TLHDQALGAA AQARKAVENN SMILQQKLAE RAKLLSQLEQ AKMQENVAAS LESMSAITAP
GTTPTLDEVR ERIERRYANA MGRAELAGNS VEGQMLDIQQ AALDAAGSAR LDQIRAGMAG
EQLRGAAERP AVTPEQQGAP VVDPAAAARL DEIRTTLGRE RGTGDSTAAG
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