| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1357 |
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| Symbol | |
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| ID | 5057810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1522725 |
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| End bp | 1526381 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640473626 |
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| Product | ABC transporter related |
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| Protein accession | YP_001158202 |
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| Protein GI | 145593905 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.572904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTGC TCCGTGACCT GTGGGCCACC GCGCCCCGCC GCATGACGGC CGTAGCCATC
CTGGTCCTGC TCGGCGCCGG CGGCCAGGCC GCTGCCGCCG CGTTGGCCGG GCCGGTCCTG
GTGCACCGCT CCGTCGGTGC CTTCGTTCTG CTCGCGGCGG CGCTGGTCGC CGCCGTGGTC
AGCGGTCTCG TGGTCAATCT GGTGCTGGCG GGGGTGACCG CCGACTGGTC CGCCGCCGTC
CGGCGCCGGC TCTGCCGGGT CGCCTTCGGG CAGGACCTGC CCACCTTGGA GGCGACGCCG
GTCGGCGAAC TACTCGACCG GATCGACGGC GATGTCTATC AGGTTGCCGC CGGGCTCCGG
TCGCAAGGTA TCCGGATCGT CCAGATGCTG ACCGCGGGCC TGCTCTCCGC GGTCGTCGCG
CTGGGTGTCT GGTGGCCCGG CGGGCTGACC ATGCTGCTGC TCGCCGGTGC CCTCGTCGTC
GTCCTGCGCG GGCCCACCGC GCGCATTGTT CCGGCCCGGA TGGCCGAGGA AGCGGCCTGG
TCCGATCTGG CCGCGGTGAT GGAGGAGGCC GTCCACGGCC AGGATGACGT GCGGACCAGC
CTCGCCCAGC CGTACGTGCT GCGGCTCTGG GCTACCCGGG CGGCGGCCGT GCTCTCCCGG
GCGAGGCCGG TATGGCGGAT GTCCGCCCGC GTCACCACCA CGGCGGTCGG CGTCACCAGC
GTCGGGATCG CCGCAGTGGT GCTCGTCGGA GCGTGGGCGC TGGCCAGCGG GCGGGTGGAC
GGCGCCCGAC TGACCGCCGT GTGGCTGCTC GCCATCGCTT TCGGCGTGAC CATCGAGCAC
GTCAGCCAGC TGGTGCCGGA GATCCAGTTC GCCCTCGGTG CCTGGGGTCG CGTGCGGCTG
CTGGCGGACT GCCCGCAGGA GAGGGTGGGC GGGCTGGCCC CGGTTGACGG CGATCTGACG
GTGCGGGGTC TGACCTTCCA ATACCCGGTT GCCGACGGCG CCCGTGGGCC GGCCCTGCGC
GACATCCACC TGACCTTCAT CCGGGGCCGT TCGTACGCCG TGGTCGGCCG GACCGGTTCG
GGTAAGTCCA CGCTGGCGAA GGTGCTCACC CGCGCGGTCG AGGTACCGGC CGGAACGGTG
CTGCTCGGCG GCCGCGACCT GCGCGACATC GATGTCGAGA AGCTGCGCCG TTGGGTGGCG
GTGGTGCCGC AGCGTACCGA GATCCTGGCC GGCACCCTCG CCGAGAACAT CGCCCTCTTC
GACCCGGACC TCCTGGACGC CGCCGCCGAT GCCCTGCGCG AACTCGGCCT CGACAGCTGG
GTCACCGAAC TCCCCGACGG TCTGCGGACC CGGCTCGGGG AGGGTGGGCA CGTCCTCTCG
GCCGGCCAGG AGCAGCTGGT CGCGTTCGCC CGGATTCTGG TACGCGACCC GCACGTGGTG
ATCCTGGACG AGGCGACCGC CCGGCTCGAT CCGGTCACCG AGGCGCGGGT TCAGGCGGCC
ACCGAACGGC TGCTGCGCGA CCGGATCGGC CTCGTCATCG CGCACCGGCT CTCCTCGGTG
CGGCACTGCG ACGAGGTGGT GGTGCTGGCC GACGGCGCGG TGCTCGAGGC CGGGCCGCTG
CGGGAGTCGG GGCGTTTCGC CGAGCTGCTC GCCACCAGTC ACGCCGCTAC CAGCGACGCC
GTCACCCCCG TCAGCACCAG CGCCCCCACG CCCGCCCAGG TCGGCGTTGG CGGCGGTGGC
CCCGGTCGTG CCAGCGGTAG CGGTGTCGGC GGCGGGGTCG GGCTGCTGGA CGGCCCGGAG
CCGGACGCCA GGCCCGACCT CGGACCGGCG GCGGCCCCAG CGAAGCCCAC GTCGCCGGTC
GCCGTGGACG TCCGGCCACC GATGGTGGCC GAGGAGTGCC GACCGCCGGC CGAGGGCGCT
CTGCCACCGA CCGGGGGCGC CTCGACACCG ACCGGGGGCG CCTCGCCGCC GCCGGTGGCC
TCGCTCGGCC GAACGCTGCG GGAAATCTGG CGGCTGCTCC GCAACGACCC GCGGTACGGC
CTGGCGGCGC TCGTGCCCTT CATCGTGCTG GTGTTGGTCG GCCTGGCCGG CCCGGTGCTG
CCGTGGCTCT GGGCGGACGT GGTCGACGGT GTCAGGGAGC CGTGGCTACC GGCGCTGGGC
ATCGCGGCCG GGCTGCTGGC CATGCTCCCC TTCCACTGGT ACTCAACATT GTGGTTCCAG
GGCTGGTGGG TACGGCAGAT GCTGCGGATC AACCTCCGGC TGGTGCACGG GCAGACCGGG
CCGCGGCGGG TCGGTGGCTA CACCCCCGCC GAGGTGGTCG CCCAGGGCGG TGACACCGAA
CGGGTCGTGG AGCTGGCCGA CAACGCGCTG GACCAGTTCG TCGGCCTGGC CCTGCTGGTG
ACGATGACCG TGATCTCCGG CAGCGTCGTA CCCGGGCTCT TCTTCGTCGG GACGATGGTG
GCGTCCGCGT TGGTGGCCAC CTCGTTCGGT CCGGCCCTGG AGCGCAGCGC ACGGGCGACG
GTGACGGCGC GGGCCGCGTA CGCGACCGCG CTGGTCTCCG GGCTCTCCGC CGCGCGGACG
GTGAAGTTGG CCGGCGCGAC CGGGCCGGTG CTCGACCACC TCGCCGACCT GGACGCCACC
CGCAGCCAGC GCCAGCGGCG GGAGATCTCC ACCCAGGTGT GGTCCCGCTC CACGCCGTCG
TTGGTCAGCG GGCTGCTACC GATCGGCGCG TGGGGGCTGT TCCTGGCCGG TGTGCTGTCG
GCCGGCGCGA CCCTGGTCGC CGTCTCCACT CTCGTCACGG CACGCTGGAT CGCCTGGACC
GCGGCGTCGT TGCTGTCCCA GGTCCCGTCG GCGCGGGTGT GGACCCAGCG GACGGTGGCG
ATGACCGGGG CGCCGGCGTA CTCGGCGGCG CTGCCGGGAG TCGATCCGGC CGCCGGGACC
GCTCCGGCGC CGTCGGCGCC GGCCCGGCAC CCCCTGCATC GGCTCGAACT GGCCGGCTTC
GGGGTCCGCC ACTCGGACGG GGTGGCAGCG GTCCGCGATG TCGACCTGAC GCTGGAACGC
GGCCAGCTCG TCCTGGTGGT TGGTCCGGTC GGGTCAGGCA AGTCGTCGCT GCTACGGGCC
CTCGCCGGGA TCGTTCCGTA CACAGGTCGG CTGATGTGGA ACGGCGTACC GGTGACCGAG
CCGGAGCTGT TTCTCCGCCC GCACCAGGTC GGCTACGTCG GTCAGCAGCC CCGGGTGCTC
TCCGGGACGG TCGCCGACAA CATCACCCTC GACCATCCGG TGGGCGCCGA CGCGGCCGTG
TCGACCGCCC AGCTCGAGCC TGACCTGGCG GCCTCCGGGG CCGGTCTCGG GCTGGCTATC
GGGCACAAGG GCACCCGGCT CTCCGGCGGG CAGCTTCAGC GTCTCGCGCT GGCCCGTGCC
CTCGCCCCGC GGAGCGAGCT GCTGGTCGCC GACGATGTCT CCTCCGCGCT GGATGTCACC
ACGGAGCTGG CGCTCTGGGC GGCGCTGCGA CAGCACGGTG TCACCGTGCT GGGGTCGACC
TCGAAACGGG CGGCGTTGCT CCGCGCCGAC CACGTCCTGG TGTTGCGCGA CGGCCGGGTG
GCCGCCCAGG GCCGCTGGTG TGAGCTGGCG GCGCAGTGGT CCCACCTGGC CGGCTGA
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| Protein sequence | MRLLRDLWAT APRRMTAVAI LVLLGAGGQA AAAALAGPVL VHRSVGAFVL LAAALVAAVV
SGLVVNLVLA GVTADWSAAV RRRLCRVAFG QDLPTLEATP VGELLDRIDG DVYQVAAGLR
SQGIRIVQML TAGLLSAVVA LGVWWPGGLT MLLLAGALVV VLRGPTARIV PARMAEEAAW
SDLAAVMEEA VHGQDDVRTS LAQPYVLRLW ATRAAAVLSR ARPVWRMSAR VTTTAVGVTS
VGIAAVVLVG AWALASGRVD GARLTAVWLL AIAFGVTIEH VSQLVPEIQF ALGAWGRVRL
LADCPQERVG GLAPVDGDLT VRGLTFQYPV ADGARGPALR DIHLTFIRGR SYAVVGRTGS
GKSTLAKVLT RAVEVPAGTV LLGGRDLRDI DVEKLRRWVA VVPQRTEILA GTLAENIALF
DPDLLDAAAD ALRELGLDSW VTELPDGLRT RLGEGGHVLS AGQEQLVAFA RILVRDPHVV
ILDEATARLD PVTEARVQAA TERLLRDRIG LVIAHRLSSV RHCDEVVVLA DGAVLEAGPL
RESGRFAELL ATSHAATSDA VTPVSTSAPT PAQVGVGGGG PGRASGSGVG GGVGLLDGPE
PDARPDLGPA AAPAKPTSPV AVDVRPPMVA EECRPPAEGA LPPTGGASTP TGGASPPPVA
SLGRTLREIW RLLRNDPRYG LAALVPFIVL VLVGLAGPVL PWLWADVVDG VREPWLPALG
IAAGLLAMLP FHWYSTLWFQ GWWVRQMLRI NLRLVHGQTG PRRVGGYTPA EVVAQGGDTE
RVVELADNAL DQFVGLALLV TMTVISGSVV PGLFFVGTMV ASALVATSFG PALERSARAT
VTARAAYATA LVSGLSAART VKLAGATGPV LDHLADLDAT RSQRQRREIS TQVWSRSTPS
LVSGLLPIGA WGLFLAGVLS AGATLVAVST LVTARWIAWT AASLLSQVPS ARVWTQRTVA
MTGAPAYSAA LPGVDPAAGT APAPSAPARH PLHRLELAGF GVRHSDGVAA VRDVDLTLER
GQLVLVVGPV GSGKSSLLRA LAGIVPYTGR LMWNGVPVTE PELFLRPHQV GYVGQQPRVL
SGTVADNITL DHPVGADAAV STAQLEPDLA ASGAGLGLAI GHKGTRLSGG QLQRLALARA
LAPRSELLVA DDVSSALDVT TELALWAALR QHGVTVLGST SKRAALLRAD HVLVLRDGRV
AAQGRWCELA AQWSHLAG
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