| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1355 |
|---|
| Symbol | |
|---|
| ID | 5057808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1521646 |
|---|
| End bp | 1522287 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640473624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158200 |
|---|
| Protein GI | 145593903 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCC GGCATGCCGC GGTGTGGACT GTCGTTCACC ACGAGCGCGC GGCTCTCGTG
CGCAGCCTCG AGACCCTGGC GCCCGAGCAG TGGAACGCTC CGACCGCCTG CCCCGGATGG
GACGTCCACG ACGTGGTCGC CCACCTCGTC GACACCGCGA AGACGACACG GCTCCGCTTC
GTCCGAGACA TGGTCACCGC CCACTTCGAC TTCGACCGCC AGAACGCGCT CGGTATCGCA
CGTGAACGCT GCGAGGACCC GACGGACACC CTCGCCGCGT TCCGAGCGGT CGTGACCCGC
ACCAGCACCC CACCGGCCGC GCTCGTCACC CGCCTCATCG AGGCGTTCGT CCACGGCGAG
GACATCCGAC GGGCAGTGGG GCTCAGCGGC AACTACCCAG TGGAGCACGT GGCGGCAGCA
CTGAAATTCC AACTCCGGAC GACGGTGAAG CTGGGCGGCG GCAGGGAGCG TGCGAGCGGG
CTGCGACTGG TCACCTCCGA CGCCTCCGTC GACAGTGGAG CTGGTGCCGA GGTGTGTGGA
ACGGCCCTCG CTCTCCTGCT CGCGGTCTCC GGTCGGCCGG TCGCACCCGA CGAGCTCACC
GGACCCGGGG CCGGGACCCT CGTCGAGCGC GTCGCCTCCT GA
|
|---|
| Protein sequence | MNSRHAAVWT VVHHERAALV RSLETLAPEQ WNAPTACPGW DVHDVVAHLV DTAKTTRLRF
VRDMVTAHFD FDRQNALGIA RERCEDPTDT LAAFRAVVTR TSTPPAALVT RLIEAFVHGE
DIRRAVGLSG NYPVEHVAAA LKFQLRTTVK LGGGRERASG LRLVTSDASV DSGAGAEVCG
TALALLLAVS GRPVAPDELT GPGAGTLVER VAS
|
|---|
| |