| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1351 |
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| Symbol | |
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| ID | 5057804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1516839 |
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| End bp | 1518089 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473620 |
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| Product | peptidase M50 |
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| Protein accession | YP_001158196 |
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| Protein GI | 145593899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.365692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.842339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACC TGCTCGGGGT GACGCTCTTC GCCCTCGCCA TCCTGATCTC GGTGAGTCTG
CACGAAGCGG GGCACCTGCT GACGGCGAAG GCCTTCGGCA TGAAGGTGAC CCGCTACTTC
GTCGGTTTCG GCCCGACCCT CTGGTCGTTC AGGCGGGGCG AGACGGAGTA CGGCCTCAAG
GGCATCCCGC TCGGCGGCTT CTGCAAGATC GTCGGGATGA CCCCGCAGGA CGACGATGTC
GACCCGGCCG ACCAGCCGCG GGCGATGTGG CGGTTCCCGG TCTGGAAGCG GACGATCGTG
ATGTCCGCCG GCTCAATCGC GCACTTCGCG CTGGCCCTGA TCGCGCTCTG GATCATCGCG
ATCTCCGCCG GTCTGCCCAA CCCGAACTTC CCGAGCACCC TGGCGCAGGT CCGGGAGGAA
CCGGCGGTCA TCCAGCTCGC CAGCTGCGTG GTCCCGGAGA ACGAGGCCCG CGCCTGCACC
GACGCCGACC CGGCCAGCCC GGCCGCGCAG GGCGAGTTGC GCGACGGCGA CCAGATCACC
GCGGTCAACG GCACCTCCGT CGCCAGCTAC GGCGACCTGC TCGTCGCCCT GCGCGCCCAG
CAGCCGGGGC AGCCGGCGCA GGTCGAGTAC CTGCGGGACG ACCAGCCGGG CAGCACGACC
GTGACGCTCG GGCAGACCCA GCGCCCGCCG CTGGACGACC CGGAGGGCAC CGTCGGGCCG
GTCGCCGCGC TCGGCGTCGG GCTCATCCCC AGCACCCCCG CCCGGATCGA GTACGGTCCG
ATCGGCGCCA TCGGCGGCAC CGCCGAGTTC ACCGGCACCA TGGCGGTGAA CACGTACGAG
GCGATGAAGC GGATCCCGCA GAAGGTCCCC GCGCTCTGGA CGGCGATCAC CGGTGGCGAG
CGGGACGTGG ACACCCCGAT CAGCGTGGTC GGCGCGAGCC GGATCGGTGG CGAGGCGGTG
GAGAACGACG CCTGGCTGCT CTTCTTCATG CTCTTCGTCT CGCTGAACTT CTTCATCGGC
GTGTTCAACC TGCTGCCGCT GCTGCCGCTG GACGGCGGCC ACATCGCCAT CGCCTGGTTC
GAACGGGCCC GCTCCTGGGT CTACACCCGG CTGCGCCGCC CCGACCCCGG CCGGGTCGAC
TATCTCAAGC TGATGCCCGT CACGTACGCG GTGATCCTGA TCGGCGGCGC GTTCACGCTG
CTGACCATCA CCGCGGACGT CGTCAACCCG ATCACGCTCT TCACAAGGTG A
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| Protein sequence | MAYLLGVTLF ALAILISVSL HEAGHLLTAK AFGMKVTRYF VGFGPTLWSF RRGETEYGLK
GIPLGGFCKI VGMTPQDDDV DPADQPRAMW RFPVWKRTIV MSAGSIAHFA LALIALWIIA
ISAGLPNPNF PSTLAQVREE PAVIQLASCV VPENEARACT DADPASPAAQ GELRDGDQIT
AVNGTSVASY GDLLVALRAQ QPGQPAQVEY LRDDQPGSTT VTLGQTQRPP LDDPEGTVGP
VAALGVGLIP STPARIEYGP IGAIGGTAEF TGTMAVNTYE AMKRIPQKVP ALWTAITGGE
RDVDTPISVV GASRIGGEAV ENDAWLLFFM LFVSLNFFIG VFNLLPLLPL DGGHIAIAWF
ERARSWVYTR LRRPDPGRVD YLKLMPVTYA VILIGGAFTL LTITADVVNP ITLFTR
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