| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1314 |
|---|
| Symbol | |
|---|
| ID | 5057767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1476887 |
|---|
| End bp | 1477381 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640473586 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001158162 |
|---|
| Protein GI | 145593865 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGGGC CCACGTTGCC TGGGGTTGGT TCCACGCCGG CTGCAGCGGG TTCCCCATCG
CGCCGGGTGG TCCCGACCTT CCGGTGGCCG CTGCCGGGGG AGCCGCCGGT CGTGCGGCGG
TTCGACCCAC CGCCGCAGCC CTGGTTGCCC GGCCACCGCG GCGTTGACCT GGCTGCCGGA
GCCGGTACGC CAGTGTTGTC GGCGGGCGAC GGTGTGGTCA CCTTCGCCGG TGCCGTGGCC
GGCCGTCCAG TGGTCACGGT GGGGCACGCC AATGGCCTAC GGACCACCTA CGAGCCGGTG
CACCCCGTCG TTGAGGTTGG CACTCCGGTC CTGGCTGGAG TGCCGATCGG TCGTCTGCGG
GCCGGGCACC CGGGCTGCGC GGCTCCAGCA TGCCTGCACT GGGGTCTGCG CCGAGGCGAC
ACCTATCTGG ACCCGTTGGC GCTGCTCGGT CGGGGGCCGG TGCGGCTGCT GCCACTCGAT
GGGGCGCTTC GGTAG
|
|---|
| Protein sequence | MVGPTLPGVG STPAAAGSPS RRVVPTFRWP LPGEPPVVRR FDPPPQPWLP GHRGVDLAAG
AGTPVLSAGD GVVTFAGAVA GRPVVTVGHA NGLRTTYEPV HPVVEVGTPV LAGVPIGRLR
AGHPGCAAPA CLHWGLRRGD TYLDPLALLG RGPVRLLPLD GALR
|
|---|
| |